RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PPDPFQ9H3Y8 114 aa11.29□□□□□ -0.6
CTNS-202ENST00000381870 GNRH2O43555 120 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 ZNF56Q15929 161 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 C2orf82Q6UX34 121 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 CLEC19AQ6UXS0 136 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
CTNS-202ENST00000381870 OPRPNQ99935 248 aaPredicted RBP11.28□□□□□ -0.6
CTNS-202ENST00000381870 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.61
CTNS-202ENST00000381870 A0A0G2JNJ9 132 aa11.27□□□□□ -0.61
CTNS-202ENST00000381870 ZFAND2AQ8N6M9 145 aa11.27□□□□□ -0.61
CTNS-202ENST00000381870 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.61
CTNS-202ENST00000381870 Q9UFV3 132 aa11.27□□□□□ -0.61
CTNS-202ENST00000381870 TMEM141Q96I45 108 aa11.27□□□□□ -0.61
CTNS-202ENST00000381870 LINC01600Q96MT4 127 aa11.27□□□□□ -0.61
CTNS-202ENST00000381870 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
CTNS-202ENST00000381870 H7C423 109 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 ECSCRQ19T08 205 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 LINC01587Q99440 93 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 JPT2Q9H910 190 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 RELNP78509 3460 aa11.26□□□□□ -0.61
CTNS-202ENST00000381870 CACNA1BQ00975 2339 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 PPP1R17O96001 155 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 POLR2KP53803 58 aaKnown RBP11.25□□□□□ -0.61
CTNS-202ENST00000381870 LINC00315P59091 139 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 LEPROTO15243 131 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
CTNS-202ENST00000381870 METTL26Q96S19 204 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 DCHS2Q6V1P9 2916 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 ABCA4P78363 2273 aa11.25□□□□□ -0.61
CTNS-202ENST00000381870 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.24□□□□□ -0.61
CTNS-202ENST00000381870 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
CTNS-202ENST00000381870 ID1P41134 155 aa11.24□□□□□ -0.61
CTNS-202ENST00000381870 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
CTNS-202ENST00000381870 LY6G5BQ8NDX9 201 aa11.24□□□□□ -0.61
CTNS-202ENST00000381870 KIF25-AS1Q9Y6Z4 181 aa11.24□□□□□ -0.61
CTNS-202ENST00000381870 MUC4Q99102 2169 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 SUMO4Q6EEV6 95 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 Q8N6K4 173 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 NCOR2Q9Y618 2525 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 ODF3BA8MYP8 253 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 M0R2P5 195 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 UBE2E1P51965 193 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 Q6ZSV7 163 aa11.23□□□□□ -0.61
CTNS-202ENST00000381870 ITLN2Q8WWU7 325 aaPredicted RBP11.23□□□□□ -0.61
CTNS-202ENST00000381870 A0A087WWL8 130 aa11.22□□□□□ -0.61
CTNS-202ENST00000381870 VCYO14598 125 aa11.22□□□□□ -0.61
CTNS-202ENST00000381870 MRPL23Q16540 153 aaKnown RBP11.22□□□□□ -0.61
CTNS-202ENST00000381870 POM121L12Q8N7R1 296 aa11.22□□□□□ -0.61
CTNS-202ENST00000381870 CLEC2BQ92478 149 aa11.22□□□□□ -0.61
CTNS-202ENST00000381870 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
CTNS-202ENST00000381870 CHD8Q9HCK8 2581 aa11.22□□□□□ -0.61
CTNS-202ENST00000381870 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 A0A087WW49 117 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 LY6HO94772 140 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
CTNS-202ENST00000381870 TMEM126AQ9H061 195 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 LENEPQ9Y5L5 61 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 ICOSQ9Y6W8 199 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 LRBAP50851 2863 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 A0A0J9YXY3 114 aa11.21□□□□□ -0.61
CTNS-202ENST00000381870 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
CTNS-202ENST00000381870 BSNQ9UPA5 3926 aa11.21□□□□□ -0.62
CTNS-202ENST00000381870 F5H697 171 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 F6UB75 175 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 G3V318 75 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 Q8N9W7 124 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
CTNS-202ENST00000381870 APC2O95996 2303 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 ATP6V0E1O15342 81 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 ACACAQ13085 2346 aa11.2□□□□□ -0.62
CTNS-202ENST00000381870 TRBV7-7A0A0K0K1E9 115 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 PRSS2P07478 247 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 U3KQE9 123 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 FAM236AA0A1B0GUQ0 79 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 FAM236BA0A1B0GV22 79 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 CEMP1Q6PRD7 247 aaPredicted RBP11.19□□□□□ -0.62
CTNS-202ENST00000381870 C9orf139Q6ZV77 190 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 IGF2RP11717 2491 aa11.19□□□□□ -0.62
CTNS-202ENST00000381870 A0A0J9YXV3 536 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 H3BT86 120 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 EBI3Q14213 229 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 LITAFQ99732 161 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 PIEZO2Q9H5I5 2752 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 FAM240AA0A1B0GVK7 77 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms