RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 NHLRC4P0CG21 123 aaPredicted RBP8.5□□□□□ -1.05
NPC1L1-202ENST00000381160 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.5□□□□□ -1.051e-6■■■□□ 16.8
NPC1L1-202ENST00000381160 VPREB3Q9UKI3 123 aa8.5□□□□□ -1.05
NPC1L1-202ENST00000381160 CRLF1O75462 422 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 IGHV3-11P01762 117 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 AJUBAQ96IF1 538 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 IGHV3OR16-10A0A075B7F0 116 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 HTN1P15515 57 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 ATXN8Q156A1 80 aa8.49□□□□□ -1.05
NPC1L1-202ENST00000381160 LINC01619G3V211 115 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 Q8N1Y9 231 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 SORL1Q92673 2214 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 SDHAF1A6NFY7 115 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 PPP1R17O96001 155 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 IGHV3-30P01768 117 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 IGHV3-30-5P0DP03 117 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 TMEM219Q86XT9 240 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 MUSTN1Q8IVN3 82 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 SPXQ9BT56 116 aa8.48□□□□□ -1.05
NPC1L1-202ENST00000381160 PRR30Q53SZ7 412 aaPredicted RBP8.47□□□□□ -1.05
NPC1L1-202ENST00000381160 ZFAND3Q9H8U3 227 aa8.47□□□□□ -1.05
NPC1L1-202ENST00000381160 H3BMM0 161 aa8.47□□□□□ -1.05
NPC1L1-202ENST00000381160 UBE2WQ96B02 151 aa8.47□□□□□ -1.05
NPC1L1-202ENST00000381160 VCYO14598 125 aa8.47□□□□□ -1.05
NPC1L1-202ENST00000381160 C9orf47Q6ZRZ4 202 aa8.47□□□□□ -1.05
NPC1L1-202ENST00000381160 SLC25A29Q8N8R3 303 aa8.47□□□□□ -1.05
NPC1L1-202ENST00000381160 COX6CP09669 75 aa8.46□□□□□ -1.05
NPC1L1-202ENST00000381160 LINC01620Q4KN68 170 aa8.46□□□□□ -1.05
NPC1L1-202ENST00000381160 MRPL23Q16540 153 aaKnown RBP8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 C9orf139Q6ZV77 190 aa8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 FAM110DQ8TAY7 271 aaPredicted RBP8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 C20orf173Q96LM9 149 aa8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 CCDC140Q96MF4 163 aa8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 DOPEY2Q9Y3R5 2298 aa8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 COX6B1P14854 86 aa8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 LINC00477Q96M19 166 aa8.46□□□□□ -1.06
NPC1L1-202ENST00000381160 TRAV12-3A0A0B4J271 114 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 PSMG3-AS1Q96PY0 264 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 CRYGDP07320 174 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 Q8N9W7 124 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 IGLV4-69A0A075B6H9 119 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 SPANXA1Q9NS26 97 aa8.45□□□□□ -1.06
NPC1L1-202ENST00000381160 CLPSL1A2RUU4 121 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 RPL13AP40429 203 aaKnown RBP8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 RNASE13Q5GAN3 156 aaKnown RBP8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 SUMO4Q6EEV6 95 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 CENPVL3A0A0U1RRI6 287 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 DUX3Q96PT4 197 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 CEP295Q9C0D2 2601 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 LRBAP50851 2863 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 A0A0J9YXV3 536 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 IGFL3Q6UXB1 125 aa8.44□□□□□ -1.06
NPC1L1-202ENST00000381160 OVOL1O14753 267 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 TSHBP01222 138 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 ZNF292O60281 2723 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 IGHV4-4A0A075B6R2 117 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 ELANEP08246 267 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 ZFAND2AQ8N6M9 145 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 TMEM126AQ9H061 195 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 M0R1W7 72 aa8.43□□□□□ -1.06
NPC1L1-202ENST00000381160 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 UNQ9165/PRO28630Q6UXU0 137 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 C2CD3Q4AC94 2353 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 ZNF580Q9UK33 172 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 TRBV7-1A0A0A6YYK4 115 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 IGHV1-69DA0A0B4J2H0 117 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 M0R2P5 195 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 SAA4P35542 130 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 LY6EQ16553 131 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 C9orf153Q5TBE3 101 aa8.42□□□□□ -1.06
NPC1L1-202ENST00000381160 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 TRBV12-3P01733 135 aa8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 CD28P10747 220 aa8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 TRAV12-2A0A075B6T6 113 aa8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 TRIAP1O43715 76 aa8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 ATRXP46100 2492 aa8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 COL27A1Q8IZC6 1860 aaPredicted RBP8.41□□□□□ -1.06
NPC1L1-202ENST00000381160 RNASE3P12724 160 aaKnown RBP8.4□□□□□ -1.06
NPC1L1-202ENST00000381160 NBL1P41271 181 aa8.4□□□□□ -1.06
NPC1L1-202ENST00000381160 GPHB5Q86YW7 130 aa8.4□□□□□ -1.06
NPC1L1-202ENST00000381160 TIMM21Q9BVV7 248 aa8.4□□□□□ -1.06
NPC1L1-202ENST00000381160 RELNP78509 3460 aa8.4□□□□□ -1.06
NPC1L1-202ENST00000381160 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
NPC1L1-202ENST00000381160 ODF3BA8MYP8 253 aa8.4□□□□□ -1.06
NPC1L1-202ENST00000381160 LY6G5BQ8NDX9 201 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms