RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 IGKV3-20P01619 116 aa10.52□□□□□ -0.73
SDC1-202ENST00000381150 METTL26Q96S19 204 aa10.52□□□□□ -0.73
SDC1-202ENST00000381150 SIRPDQ9H106 197 aa10.52□□□□□ -0.73
SDC1-202ENST00000381150 TEX49A0A1B0GTD5 131 aa10.52□□□□□ -0.73
SDC1-202ENST00000381150 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
SDC1-202ENST00000381150 PRORYQ9H606 182 aa10.52□□□□□ -0.73
SDC1-202ENST00000381150 A0A0J9YY99 117 aa10.51□□□□□ -0.73
SDC1-202ENST00000381150 TMEM262E9PQX1 116 aa10.51□□□□□ -0.73
SDC1-202ENST00000381150 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
SDC1-202ENST00000381150 ATP6V0E2Q8NHE4 81 aa10.51□□□□□ -0.73
SDC1-202ENST00000381150 TOMM6Q96B49 74 aa10.51□□□□□ -0.73
SDC1-202ENST00000381150 ASIPP42127 132 aa10.51□□□□□ -0.73
SDC1-202ENST00000381150 SHISA2Q6UWI4 295 aa10.51□□□□□ -0.73
SDC1-202ENST00000381150 GAGE12JA6NER3 117 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 GAGE7O76087 117 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 GAGE12FP0CL80 117 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 GAGE12GP0CL81 117 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 GAGE12IP0CL82 117 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 UBE2D1P51668 147 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 GAGE4Q13068 117 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 DPH3P1Q9H4G8 78 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 CD7P09564 240 aa10.5□□□□□ -0.73
SDC1-202ENST00000381150 OOSP1A8MZH6 123 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 HTN1P15515 57 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 MINOS1Q5TGZ0 78 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 MINOS1-NBL1R4GNA1 71 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 IGHV3OR16-10A0A075B7F0 116 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 C15orf53Q8NAA6 179 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 ITLN2Q8WWU7 325 aaPredicted RBP10.49□□□□□ -0.73
SDC1-202ENST00000381150 USP9YO00507 2555 aaPredicted RBP10.49□□□□□ -0.73
SDC1-202ENST00000381150 VPS13CQ709C8 3753 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
SDC1-202ENST00000381150 IFITM1P13164 125 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 NDUFV3P56181 108 aaKnown RBP10.48□□□□□ -0.73
SDC1-202ENST00000381150 MYO9AB2RTY4 2548 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 WNK1Q9H4A3 2382 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 TRAV8-4A0A0B4J246 113 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 UBE2D3P61077 147 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 UBE2D2P62837 147 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 OR10J6PQ8NGY7 276 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 CRYBG3Q68DQ2 2970 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 J3QQQ9 107 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 ATP6V0E1O15342 81 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
SDC1-202ENST00000381150 LMO4P61968 165 aa10.47□□□□□ -0.73
SDC1-202ENST00000381150 Q8N1Y9 231 aa10.47□□□□□ -0.73
SDC1-202ENST00000381150 TMEM219Q86XT9 240 aa10.47□□□□□ -0.73
SDC1-202ENST00000381150 IGHV7-81A0A0B4J1V7 117 aa10.46□□□□□ -0.73
SDC1-202ENST00000381150 ELANEP08246 267 aa10.46□□□□□ -0.73
SDC1-202ENST00000381150 ZNF56Q15929 161 aa10.46□□□□□ -0.73
SDC1-202ENST00000381150 MUSTN1Q8IVN3 82 aa10.46□□□□□ -0.73
SDC1-202ENST00000381150 Q8N9W7 124 aa10.46□□□□□ -0.73
SDC1-202ENST00000381150 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 LINC01546A6NGU7 62 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 PMVKQ15126 192 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 RNASE13Q5GAN3 156 aaKnown RBP10.46□□□□□ -0.74
SDC1-202ENST00000381150 LINC00477Q96M19 166 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 SPXQ9BT56 116 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 UBTD1Q9HAC8 227 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 ZNF580Q9UK33 172 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 POLQO75417 2590 aa10.46□□□□□ -0.74
SDC1-202ENST00000381150 A0A0U1RRA0 63 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 COX8CQ7Z4L0 72 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 CRYGDP07320 174 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 DUX3Q96PT4 197 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 VCX2Q9H322 139 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 TRAV21A0A0B4J279 112 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 UBE2E1P51965 193 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 C2orf82Q6UX34 121 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
SDC1-202ENST00000381150 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
SDC1-202ENST00000381150 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
SDC1-202ENST00000381150 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
SDC1-202ENST00000381150 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
SDC1-202ENST00000381150 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
SDC1-202ENST00000381150 COX6B1P14854 86 aa10.44□□□□□ -0.74
SDC1-202ENST00000381150 Q6ZSV7 163 aa10.44□□□□□ -0.74
SDC1-202ENST00000381150 ZNRF2Q8NHG8 242 aa10.44□□□□□ -0.74
SDC1-202ENST00000381150 TMEM190Q8WZ59 177 aa10.43□□□□□ -0.74
SDC1-202ENST00000381150 BPESC1Q9GZL8 116 aa10.43□□□□□ -0.74
SDC1-202ENST00000381150 RBAKDNA6NC62 111 aa10.43□□□□□ -0.74
SDC1-202ENST00000381150 CHCHD5Q9BSY4 110 aa10.43□□□□□ -0.74
SDC1-202ENST00000381150 GNLYP22749 145 aa10.43□□□□□ -0.74
SDC1-202ENST00000381150 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
SDC1-202ENST00000381150 IGLV4-69A0A075B6H9 119 aa10.42□□□□□ -0.74
SDC1-202ENST00000381150 TSHBP01222 138 aa10.42□□□□□ -0.74
SDC1-202ENST00000381150 RPL32P62910 135 aaKnown RBP10.42□□□□□ -0.74
SDC1-202ENST00000381150 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
SDC1-202ENST00000381150 RHODO00212 210 aa10.42□□□□□ -0.74
SDC1-202ENST00000381150 SRSF2Q01130 221 aaKnown RBP10.42□□□□□ -0.74
SDC1-202ENST00000381150 LINC01620Q4KN68 170 aa10.42□□□□□ -0.74
SDC1-202ENST00000381150 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms