RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 Q8N1Y9 231 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 INAFM1C9JVW0 142 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 CRYGDP07320 174 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 FXYD5Q96DB9 178 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 C9orf85Q96MD7 179 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 A4D1N5 150 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 P0DMU3 169 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 DCANP1Q8TF63 244 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 BRWD3Q6RI45 1802 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 CENPVL3A0A0U1RRI6 287 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 PRR4Q16378 134 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
CHD3-203ENST00000380358 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
CHD3-203ENST00000380358 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
CHD3-203ENST00000380358 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
CHD3-203ENST00000380358 TRAV1-1A0A0B4J248 108 aa9.65□□□□□ -0.86
CHD3-203ENST00000380358 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
CHD3-203ENST00000380358 RLFQ13129 1914 aa9.65□□□□□ -0.86
CHD3-203ENST00000380358 V9GYV3 84 aa9.65□□□□□ -0.86
CHD3-203ENST00000380358 IGLC1P0CG04 106 aa9.65□□□□□ -0.86
CHD3-203ENST00000380358 LINC00269Q8N2A0 174 aa9.65□□□□□ -0.86
CHD3-203ENST00000380358 IGLV9-49A0A0B4J1Y8 123 aa9.65□□□□□ -0.87
CHD3-203ENST00000380358 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.87
CHD3-203ENST00000380358 CFPP27918 469 aa9.65□□□□□ -0.87
CHD3-203ENST00000380358 LCTP09848 1927 aa9.64□□□□□ -0.87
CHD3-203ENST00000380358 FREM1Q5H8C1 2179 aa9.64□□□□□ -0.87
CHD3-203ENST00000380358 C9JQL5 133 aa9.64□□□□□ -0.87
CHD3-203ENST00000380358 LGALS9BQ3B8N2 356 aa9.64□□□□□ -0.87
CHD3-203ENST00000380358 LGALS9CQ6DKI2 356 aa9.64□□□□□ -0.87
CHD3-203ENST00000380358 TMEM263Q8WUH6 116 aaKnown RBP9.64□□□□□ -0.87
CHD3-203ENST00000380358 SBF2Q86WG5 1849 aa9.64□□□□□ -0.87
CHD3-203ENST00000380358 FGF23Q9GZV9 251 aaPredicted RBP9.64□□□□□ -0.87
CHD3-203ENST00000380358 TRBV7-3A0A075B6L6 115 aa9.63□□□□□ -0.87
CHD3-203ENST00000380358 ZNF726P1Q15940 193 aa9.63□□□□□ -0.87
CHD3-203ENST00000380358 SMIM20Q8N5G0 67 aa9.63□□□□□ -0.87
CHD3-203ENST00000380358 LINC00482Q8N8I6 264 aa9.63□□□□□ -0.87
CHD3-203ENST00000380358 CTSZQ9UBR2 303 aa9.63□□□□□ -0.87
CHD3-203ENST00000380358 COL4A1P02462 1669 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 SLPIP03973 132 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 COL18A1P39060 1754 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 MED12LQ86YW9 2145 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 FHL1Q13642 323 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 CSRP3P50461 194 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 C20orf78Q9BR46 151 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 FAM215AQ9Y5M1 114 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 LRRC37AA6NMS7 1700 aa9.62□□□□□ -0.87
CHD3-203ENST00000380358 CRYGBP07316 175 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 ADCYAP1P18509 176 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 DEFB131BA0A096LNP1 70 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 K7EN84 100 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 COX7BP24311 80 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 QRFPP83859 136 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 RIF1Q5UIP0 2472 aaKnown RBP9.61□□□□□ -0.87
CHD3-203ENST00000380358 Q0VG73 95 aa9.61□□□□□ -0.87
CHD3-203ENST00000380358 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.61□□□□□ -0.87
CHD3-203ENST00000380358 TRBV6-6A0A0A6YYG2 114 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 FNDC10F2Z333 226 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 IGKV2-28A0A075B6P5 120 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 IGKV2D-28P01615 120 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 Q8TCH9 128 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 RALGAPA2Q2PPJ7 1873 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 LINC00526Q96FQ7 95 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 MDFICQ9P1T7 246 aa9.6□□□□□ -0.87
CHD3-203ENST00000380358 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
CHD3-203ENST00000380358 LINC00173Q6ZV60 143 aa9.59□□□□□ -0.87
CHD3-203ENST00000380358 SPANXA1Q9NS26 97 aa9.59□□□□□ -0.87
CHD3-203ENST00000380358 LGALS9O00182 355 aa9.59□□□□□ -0.87
CHD3-203ENST00000380358 C3orf84H3BNL1 204 aa9.59□□□□□ -0.87
CHD3-203ENST00000380358 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
CHD3-203ENST00000380358 BPY2O14599 106 aa9.59□□□□□ -0.87
CHD3-203ENST00000380358 ADAMTS9Q9P2N4 1935 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 WT1P19544 449 aaPredicted RBP9.58□□□□□ -0.88
CHD3-203ENST00000380358 TMEM14CQ9P0S9 112 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 NCOA6Q14686 2063 aaPredicted RBP9.58□□□□□ -0.88
CHD3-203ENST00000380358 CREBBPQ92793 2442 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 IGHV2-70P01814 119 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 IGHV7-81A0A0B4J1V7 117 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 C15orf65H3BRN8 121 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 LYL1P12980 280 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 UPK3BQ9BT76 320 aa9.58□□□□□ -0.88
CHD3-203ENST00000380358 UBE2D2P62837 147 aa9.57□□□□□ -0.88
CHD3-203ENST00000380358 PLA2G1BP04054 148 aaKnown RBP9.57□□□□□ -0.88
CHD3-203ENST00000380358 TP53TG3Q9ULZ0 132 aa9.57□□□□□ -0.88
CHD3-203ENST00000380358 PLA2G2EQ9NZK7 142 aa9.57□□□□□ -0.88
CHD3-203ENST00000380358 KIR2DL5BQ8NHK3 375 aa9.57□□□□□ -0.88
CHD3-203ENST00000380358 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 RPL37AP8A6NKH3 93 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 TNRC6AQ8NDV7 1962 aaKnown RBP9.56□□□□□ -0.88
CHD3-203ENST00000380358 HILS1P60008 231 aa9.56□□□□□ -0.88
CHD3-203ENST00000380358 POM121L12Q8N7R1 296 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms