RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 NXT2Q9NPJ8 142 aaKnown RBP5.96□□□□□ -1.46
PDLIM5-204ENST00000380176 FCER1GP30273 86 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 ASIPP42127 132 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 C14orf178Q8N769 122 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 Q8N8P6 123 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 NF1P21359 2839 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 CCDC168Q8NDH2 2452 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 TMEM89A2RUT3 159 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 KLLNB2CW77 178 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 CD5LO43866 347 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 IGKV3-20P01619 116 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 RIPPLY3P57055 190 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 RPL32P62910 135 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 DEFB136Q30KP8 78 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 PSMG4Q5JS54 123 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 MYOZ3Q8TDC0 251 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 PHLDA3Q9Y5J5 127 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 G3V4G9 280 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 LGALS1P09382 135 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 HOXD3P31249 432 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 PTH2Q96A98 100 aa5.95□□□□□ -1.46
PDLIM5-204ENST00000380176 CHD6Q8TD26 2715 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 TRAV12-3A0A0B4J271 114 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 EIF4EBP3O60516 100 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 ADAMTSL5Q6ZMM2 481 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 RPL39LQ96EH5 51 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 COX11Q9Y6N1 276 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 FLNAP21333 2647 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 TRAV12-2A0A075B6T6 113 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 NUDT3O95989 172 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 ELANEP08246 267 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 COX8AP10176 69 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 MRPL23Q16540 153 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 C2orf91Q6ZV80 131 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 RASL10AQ92737 203 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 JPT2Q9H910 190 aa5.94□□□□□ -1.46
PDLIM5-204ENST00000380176 K7EQG2 157 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 FGF6P10767 208 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 LRRC75A-AS1Q8N1F1 130 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 MRAP2Q96G30 205 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 UBE2E2Q96LR5 201 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 MGPP08493 103 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 SMIM17P0DL12 118 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 SLURP1P55000 103 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 LAGE3Q14657 143 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 DEFB125Q8N687 156 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 DUX3Q96PT4 197 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 A0A0J9YX75 114 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 PRSS1P07477 247 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 VAMP3Q15836 100 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 FAM159AQ6UWV7 190 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 WFDC11Q8NEX6 87 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 DPH3P1Q9H4G8 78 aa5.93□□□□□ -1.46
PDLIM5-204ENST00000380176 LGALS9O00182 355 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 CD7P09564 240 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 BVES-AS1Q5T3Y7 98 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 SMIM2Q9BVW6 85 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 PDZD2O15018 2839 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 MED14OSP0DP75 135 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 LINC00315P59091 139 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 SNRPD3P62318 126 aaKnown RBP5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 PCP2Q8IVA1 136 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 DEFB104AQ8WTQ1 72 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 FOXC2Q99958 501 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 SS18L2Q9UHA2 77 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 HHLA3Q9XRX5 114 aa5.92□□□□□ -1.46
PDLIM5-204ENST00000380176 ACANP16112 2415 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 C7orf71A4D174 169 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 SUMO2P61956 95 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 SPINK13Q1W4C9 94 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 MDFICQ9P1T7 246 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 KIF25-AS1Q9Y6Z4 181 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 WNK1Q9H4A3 2382 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 IGKV2D-26A0A0A0MRZ7 120 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 SEC61GP60059 68 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 Q8N2B8 174 aa5.91□□□□□ -1.46
PDLIM5-204ENST00000380176 NXPH4O95158 308 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 NMUP48645 174 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 NEGR1Q7Z3B1 354 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 OR1N2Q8NGR9 330 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 AP1S3Q96PC3 154 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 SIGMAR1Q99720 223 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 TTTY13Q9BZ97 58 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 ITPR2Q14571 2701 aa5.9□□□□□ -1.46
PDLIM5-204ENST00000380176 AZU1P20160 251 aa5.9□□□□□ -1.47
PDLIM5-204ENST00000380176 MRPL35Q9NZE8 188 aaKnown RBP5.9□□□□□ -1.47
PDLIM5-204ENST00000380176 SETD2Q9BYW2 2564 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 IGHV3-16A0A0C4DH30 117 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 AMTNQ6UX39 209 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 C20orf78Q9BR46 151 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 ANK3Q12955 4377 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 KNCNA6PVL3 124 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 TAX1BP3O14907 124 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 ATP5LO75964 103 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 IGKCP01834 107 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 RBMY1A1P0DJD3 496 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 RBMY1CP0DJD4 496 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 C12orf54Q6X4T0 127 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms