RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 C11orf86A6NJI1 115 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 RHOHQ15669 191 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 C10orf55Q5SWW7 151 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 TMEM200BQ69YZ2 307 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 CLEC2BQ92478 149 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 TRGV3P03979 118 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 LOXP28300 417 aaPredicted RBP5.66□□□□□ -1.5
CDKL5-201ENST00000379989 CCL8P80075 99 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 RPL18AQ02543 176 aaKnown RBP5.66□□□□□ -1.5
CDKL5-201ENST00000379989 ERCC8Q13216 396 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 MUSTN1Q8IVN3 82 aa5.66□□□□□ -1.5
CDKL5-201ENST00000379989 IGHV1-8P0DP01 117 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 PEMTQ9UBM1 199 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 NACAE9PAV3 2078 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 LYZP61626 148 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 MINOS1Q5TGZ0 78 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 FAM216BQ8N7L0 139 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 ICOSQ9Y6W8 199 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 MINOS1-NBL1R4GNA1 71 aa5.65□□□□□ -1.5
CDKL5-201ENST00000379989 EPM2AB3EWF7 344 aa5.65□□□□□ -1.51
CDKL5-201ENST00000379989 LST1O00453 97 aa5.65□□□□□ -1.51
CDKL5-201ENST00000379989 CDSNQ15517 529 aa5.65□□□□□ -1.51
CDKL5-201ENST00000379989 C11orf71Q6IPW1 123 aa5.65□□□□□ -1.51
CDKL5-201ENST00000379989 DCANP1Q8TF63 244 aa5.65□□□□□ -1.51
CDKL5-201ENST00000379989 C16orf95Q9H693 158 aa5.65□□□□□ -1.51
CDKL5-201ENST00000379989 CELSR3Q9NYQ7 3312 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 AKAP13Q12802 2813 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.64□□□□□ -1.51
CDKL5-201ENST00000379989 IGHV3-21A0A0B4J1V1 117 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 UBE2E1P51965 193 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 WFDC11Q8NEX6 87 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 IGLV1-47P01700 117 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 FHL2Q14192 279 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 COX8CQ7Z4L0 72 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 PRIMA1Q86XR5 153 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 A0A0U1RQV1 116 aa5.64□□□□□ -1.51
CDKL5-201ENST00000379989 RAI1Q7Z5J4 1906 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-201ENST00000379989 ADORA2A-AS1P86434 159 aa5.63□□□□□ -1.51
CDKL5-201ENST00000379989 LYPD1Q8N2G4 141 aa5.63□□□□□ -1.51
CDKL5-201ENST00000379989 CCL17Q92583 94 aa5.63□□□□□ -1.51
CDKL5-201ENST00000379989 PSMB8P28062 276 aa5.63□□□□□ -1.51
CDKL5-201ENST00000379989 ORMDL2Q53FV1 153 aa5.63□□□□□ -1.51
CDKL5-201ENST00000379989 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
CDKL5-201ENST00000379989 IGKV2-40A0A087WW87 121 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-201ENST00000379989 TRAV8-3A0A0A6YYJ7 113 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 A0A1W2PRX2 142 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 IGKV2D-40P01614 121 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-201ENST00000379989 C22orf34Q6ZV56 151 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 IL17DQ8TAD2 202 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 Q8TAT8 98 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 TIMM21Q9BVV7 248 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 SIRPDQ9H106 197 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 ZNRD1Q9P1U0 126 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 NPC2P61916 151 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 KLK9Q2XQG4 91 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 HCP5Q6MZN7 132 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 KLK9Q9UKQ9 250 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 NBR2O15453 112 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 SYNJ2BPP57105 145 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 C9orf139Q6ZV77 190 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 DEFB108BQ8NET1 73 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 C16orf92Q96LL3 132 aa5.62□□□□□ -1.51
CDKL5-201ENST00000379989 BUB1B-PAK6H3BSN5 160 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 PLGLAQ15195 96 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 ZNF491Q8N8L2 437 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 NPBQ8NG41 125 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 TTC28Q96AY4 2481 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 PRSS2P07478 247 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 COX6CP09669 75 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
CDKL5-201ENST00000379989 Q6ZSV7 163 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 KMT2BQ9UMN6 2715 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-201ENST00000379989 FAM186AA6NE01 2351 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 TRAV12-2A0A075B6T6 113 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 TSHBP01222 138 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 IGLV2-23P01705 113 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 FP248Q71RG6 208 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-201ENST00000379989 FAM223AQ8IWN6 122 aa5.61□□□□□ -1.51
CDKL5-201ENST00000379989 NDUFC2-KCTD14E9PQ53 114 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 PAPPA-AS1Q5QFB9 102 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 DPM3Q9P2X0 92 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 ODF3BA8MYP8 253 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 H3BRN7 92 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 I3L3M4 83 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 DSCR9P59020 149 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 MGAQ8IWI9 3026 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 A0A087WVE0 104 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 RPL27AP46776 148 aaKnown RBP5.6□□□□□ -1.51
CDKL5-201ENST00000379989 FAM201AQ5SY85 155 aa5.6□□□□□ -1.51
CDKL5-201ENST00000379989 MALRD1Q5VYJ5 2156 aa5.59□□□□□ -1.51
CDKL5-201ENST00000379989 IGHV1-3A0A0C4DH29 117 aa5.59□□□□□ -1.51
CDKL5-201ENST00000379989 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
CDKL5-201ENST00000379989 TP53TG1Q9Y2A0 90 aa5.59□□□□□ -1.51
CDKL5-201ENST00000379989 SERP1Q9Y6X1 66 aa5.59□□□□□ -1.51
CDKL5-201ENST00000379989 NDUFC2O95298 119 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms