RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 FAM210AQ96ND0 272 aa12.88□□□□□ -0.35
TMEM88B-201ENST00000378821 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
TMEM88B-201ENST00000378821 K7EP13 123 aa12.87□□□□□ -0.35
TMEM88B-201ENST00000378821 SRIP30626 198 aa12.87□□□□□ -0.35
TMEM88B-201ENST00000378821 UFSP1Q6NVU6 142 aa12.87□□□□□ -0.35
TMEM88B-201ENST00000378821 ZFP82Q8N141 532 aa12.87□□□□□ -0.35
TMEM88B-201ENST00000378821 SNAI2O43623 268 aa12.86□□□□□ -0.35
TMEM88B-201ENST00000378821 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
TMEM88B-201ENST00000378821 Q6ZSN1 163 aa12.86□□□□□ -0.35
TMEM88B-201ENST00000378821 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
TMEM88B-201ENST00000378821 DAZAP1Q96EP5 407 aaKnown RBP12.86□□□□□ -0.35
TMEM88B-201ENST00000378821 EIF5A2Q9GZV4 153 aaKnown RBP12.86□□□□□ -0.35
TMEM88B-201ENST00000378821 TRBV6-4A0A1B0GX49 114 aa12.85□□□□□ -0.35
TMEM88B-201ENST00000378821 K7EN84 100 aa12.85□□□□□ -0.35
TMEM88B-201ENST00000378821 GZMBP10144 247 aa12.85□□□□□ -0.35
TMEM88B-201ENST00000378821 RHOHQ15669 191 aa12.85□□□□□ -0.35
TMEM88B-201ENST00000378821 OR2D3Q8NGH3 330 aa12.85□□□□□ -0.35
TMEM88B-201ENST00000378821 SFRP2Q96HF1 295 aa12.85□□□□□ -0.35
TMEM88B-201ENST00000378821 SSBP4Q9BWG4 385 aaPredicted RBP12.85□□□□□ -0.35
TMEM88B-201ENST00000378821 MUC21A0A0G2JKD1 596 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 MUC21A0A140T8X8 626 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 P01737 135 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 OR5AL1P0C617 328 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 CEBPGP53567 150 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 OCC1Q8TAD7 63 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 PRADC1Q9BSG0 188 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 BIN3Q9NQY0 253 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 ABCA13Q86UQ4 5058 aa12.84□□□□□ -0.35
TMEM88B-201ENST00000378821 A0A087WWL8 130 aa12.83□□□□□ -0.36
TMEM88B-201ENST00000378821 RHODO00212 210 aa12.83□□□□□ -0.36
TMEM88B-201ENST00000378821 NDUFS6O75380 124 aaKnown RBP12.83□□□□□ -0.36
TMEM88B-201ENST00000378821 TIRAPP58753 221 aa12.83□□□□□ -0.36
TMEM88B-201ENST00000378821 FAM74A4Q5TZK3 123 aa12.83□□□□□ -0.36
TMEM88B-201ENST00000378821 TRAV9-2A0A087WT02 112 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 CRYGDP07320 174 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 SRP19P09132 144 aaKnown RBP12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 RPS20P60866 119 aaKnown RBP12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 SH2D6Q7Z4S9 175 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 NUDT10Q8NFP7 164 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 NUDT11Q96G61 164 aa12.82□□□□□ -0.36
TMEM88B-201ENST00000378821 RNASE7Q9H1E1 156 aaKnown RBP12.81□□□□□ -0.36
TMEM88B-201ENST00000378821 PGPEP1Q9NXJ5 209 aa12.81□□□□□ -0.36
TMEM88B-201ENST00000378821 TNFRSF18Q9Y5U5 241 aa12.81□□□□□ -0.36
TMEM88B-201ENST00000378821 LY96Q9Y6Y9 160 aa12.81□□□□□ -0.36
TMEM88B-201ENST00000378821 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
TMEM88B-201ENST00000378821 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
TMEM88B-201ENST00000378821 FER1L6-AS1Q8NA97 138 aa12.8□□□□□ -0.36
TMEM88B-201ENST00000378821 SMIM7Q9BQ49 75 aa12.8□□□□□ -0.36
TMEM88B-201ENST00000378821 TPPP3Q9BW30 176 aa12.8□□□□□ -0.36
TMEM88B-201ENST00000378821 Q9UF83 564 aa12.8□□□□□ -0.36
TMEM88B-201ENST00000378821 APOBP04114 4563 aaKnown RBP12.79□□□□□ -0.36
TMEM88B-201ENST00000378821 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
TMEM88B-201ENST00000378821 SSTP61278 116 aa12.79□□□□□ -0.36
TMEM88B-201ENST00000378821 Q8N1X5 172 aa12.79□□□□□ -0.36
TMEM88B-201ENST00000378821 MAPKAPK5-AS1Q8N8E1 139 aa12.79□□□□□ -0.36
TMEM88B-201ENST00000378821 RPP21Q9H633 154 aaKnown RBP12.79□□□□□ -0.36
TMEM88B-201ENST00000378821 XKRY2A2RUG3 117 aa12.78□□□□□ -0.36
TMEM88B-201ENST00000378821 GAGE12JA6NER3 117 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 ZNF727A8MUV8 499 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 C9JQL5 133 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 EVI2AP22794 236 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 ERVFC1-1P60608 527 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 SRSF3P84103 164 aaKnown RBP12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 GAGE1Q13065 139 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 GAGE4Q13068 117 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 GAGE5Q13069 117 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 GAGE13Q4V321 117 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 MSRB1Q9NZV6 116 aa12.77□□□□□ -0.37
TMEM88B-201ENST00000378821 DNAH5Q8TE73 4624 aa12.76□□□□□ -0.37
TMEM88B-201ENST00000378821 A0A087WTM6 91 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 EREGO14944 169 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 CTRLP40313 264 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 ZNF56Q15929 161 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 LYZL1Q6UWQ5 148 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 FAM231DQ6ZW35 169 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 LINC01551Q86U37 167 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 C10orf126Q8N4M7 172 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 ATP6V0E2Q8NHE4 81 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 AP1S3Q96PC3 154 aa12.75□□□□□ -0.37
TMEM88B-201ENST00000378821 CACNG7P62955 275 aa12.74□□□□□ -0.37
TMEM88B-201ENST00000378821 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
TMEM88B-201ENST00000378821 F2Z2F3 143 aa12.73□□□□□ -0.37
TMEM88B-201ENST00000378821 GATCO43716 136 aaKnown RBP12.73□□□□□ -0.37
TMEM88B-201ENST00000378821 RAB4BP61018 213 aa12.73□□□□□ -0.37
TMEM88B-201ENST00000378821 PEA15Q15121 130 aa12.73□□□□□ -0.37
TMEM88B-201ENST00000378821 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
TMEM88B-201ENST00000378821 GTSF1LQ9H1H1 148 aa12.73□□□□□ -0.37
TMEM88B-201ENST00000378821 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
TMEM88B-201ENST00000378821 GTSF1Q8WW33 167 aa12.72□□□□□ -0.37
TMEM88B-201ENST00000378821 TRBV10-1A0A0K0K1A3 114 aa12.71□□□□□ -0.37
TMEM88B-201ENST00000378821 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
TMEM88B-201ENST00000378821 FAM74A3Q4VXF1 159 aa12.71□□□□□ -0.37
TMEM88B-201ENST00000378821 LELP1Q5T871 98 aa12.71□□□□□ -0.37
TMEM88B-201ENST00000378821 SMDT1Q9H4I9 107 aa12.71□□□□□ -0.37
TMEM88B-201ENST00000378821 IBA57-AS1B1ANH7 110 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms