RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 CRYGDP07320 174 aa11.55□□□□□ -0.56
RER1-202ENST00000378512 RPL19P84098 196 aaKnown RBP11.55□□□□□ -0.56
RER1-202ENST00000378512 CENPWQ5EE01 88 aa11.55□□□□□ -0.56
RER1-202ENST00000378512 ZFP82Q8N141 532 aa11.55□□□□□ -0.56
RER1-202ENST00000378512 DNAH5Q8TE73 4624 aa11.55□□□□□ -0.56
RER1-202ENST00000378512 OR5AL1P0C617 328 aa11.54□□□□□ -0.56
RER1-202ENST00000378512 LINC00315P59091 139 aa11.54□□□□□ -0.56
RER1-202ENST00000378512 ALKAL2Q6UX46 152 aa11.54□□□□□ -0.56
RER1-202ENST00000378512 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
RER1-202ENST00000378512 Q9UF83 564 aa11.53□□□□□ -0.56
RER1-202ENST00000378512 LY96Q9Y6Y9 160 aa11.53□□□□□ -0.56
RER1-202ENST00000378512 RAB19A4D1S5 217 aa11.52□□□□□ -0.56
RER1-202ENST00000378512 BLOC1S1P78537 153 aa11.52□□□□□ -0.56
RER1-202ENST00000378512 PRR27Q6MZM9 219 aa11.52□□□□□ -0.56
RER1-202ENST00000378512 M0R381 172 aa11.52□□□□□ -0.57
RER1-202ENST00000378512 NKX2-5P52952 324 aaPredicted RBP11.52□□□□□ -0.57
RER1-202ENST00000378512 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
RER1-202ENST00000378512 OR10AG1Q8NH19 301 aa11.52□□□□□ -0.57
RER1-202ENST00000378512 GTSF1LQ9H1H1 148 aa11.52□□□□□ -0.57
RER1-202ENST00000378512 MED9Q9NWA0 146 aa11.52□□□□□ -0.57
RER1-202ENST00000378512 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.57
RER1-202ENST00000378512 TRAV9-2A0A087WT02 112 aa11.51□□□□□ -0.57
RER1-202ENST00000378512 GNG4P50150 75 aa11.51□□□□□ -0.57
RER1-202ENST00000378512 LELP1Q5T871 98 aa11.51□□□□□ -0.57
RER1-202ENST00000378512 SPATA12Q7Z6I5 190 aa11.51□□□□□ -0.57
RER1-202ENST00000378512 ATP6V0E2Q8NHE4 81 aa11.51□□□□□ -0.57
RER1-202ENST00000378512 A0A087WWL8 130 aa11.5□□□□□ -0.57
RER1-202ENST00000378512 IGLC6P0CF74 106 aa11.5□□□□□ -0.57
RER1-202ENST00000378512 KRTAP10-2P60368 255 aa11.5□□□□□ -0.57
RER1-202ENST00000378512 LINC01556Q5JQF7 62 aa11.5□□□□□ -0.57
RER1-202ENST00000378512 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
RER1-202ENST00000378512 NDUFS6O75380 124 aaKnown RBP11.49□□□□□ -0.57
RER1-202ENST00000378512 EVI2AP22794 236 aa11.49□□□□□ -0.57
RER1-202ENST00000378512 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
RER1-202ENST00000378512 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
RER1-202ENST00000378512 TMEM250H0YL14 139 aa11.48□□□□□ -0.57
RER1-202ENST00000378512 GAGE12JA6NER3 117 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 CDK2AP2O75956 126 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 GAGE1Q13065 139 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 GAGE4Q13068 117 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 GAGE5Q13069 117 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 NFE4Q86UQ8 179 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 BIN3Q9NQY0 253 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 KIF25-AS1Q9Y6Z4 181 aa11.47□□□□□ -0.57
RER1-202ENST00000378512 TRAV8-6A0A0B4J262 113 aa11.46□□□□□ -0.57
RER1-202ENST00000378512 FUSP35637 526 aaKnown RBP eCLIP11.46□□□□□ -0.579e-8■■■□□ 15.8
RER1-202ENST00000378512 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.57
RER1-202ENST00000378512 RAB4BP61018 213 aa11.46□□□□□ -0.57
RER1-202ENST00000378512 MAPKAPK5-AS1Q8N8E1 139 aa11.46□□□□□ -0.57
RER1-202ENST00000378512 OR10G8Q8NGN5 311 aa11.46□□□□□ -0.57
RER1-202ENST00000378512 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.57
RER1-202ENST00000378512 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.57
RER1-202ENST00000378512 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
RER1-202ENST00000378512 OR2D3Q8NGH3 330 aa11.45□□□□□ -0.58
RER1-202ENST00000378512 A0A087WWC5 75 aa11.44□□□□□ -0.58
RER1-202ENST00000378512 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
RER1-202ENST00000378512 K7EN84 100 aa11.44□□□□□ -0.58
RER1-202ENST00000378512 P01737 135 aa11.44□□□□□ -0.58
RER1-202ENST00000378512 GZMBP10144 247 aa11.44□□□□□ -0.58
RER1-202ENST00000378512 SPANXN1Q5VSR9 72 aa11.44□□□□□ -0.58
RER1-202ENST00000378512 OCC1Q8TAD7 63 aa11.44□□□□□ -0.58
RER1-202ENST00000378512 TRBV7-3A0A075B6L6 115 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 MUC21A0A0G2JKD1 596 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 MUC21A0A140T8X8 626 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 UBE2D3P61077 147 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 UBE2D2P62837 147 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 NUDT10Q8NFP7 164 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 NUDT11Q96G61 164 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 F2Z2F3 143 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 FAM210AQ96ND0 272 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 CNFNQ9BYD5 112 aa11.43□□□□□ -0.58
RER1-202ENST00000378512 RPL36AP83881 106 aaKnown RBP11.42□□□□□ -0.58
RER1-202ENST00000378512 NEXN-AS1Q8NBZ9 246 aa11.42□□□□□ -0.58
RER1-202ENST00000378512 RPL36ALQ969Q0 106 aaKnown RBP11.42□□□□□ -0.58
RER1-202ENST00000378512 AP1S3Q96PC3 154 aa11.42□□□□□ -0.58
RER1-202ENST00000378512 CTRLP40313 264 aa11.41□□□□□ -0.58
RER1-202ENST00000378512 CACNG7P62955 275 aa11.41□□□□□ -0.58
RER1-202ENST00000378512 LAGE3Q14657 143 aa11.41□□□□□ -0.58
RER1-202ENST00000378512 WDR73Q6P4I2 378 aa11.41□□□□□ -0.58
RER1-202ENST00000378512 ZNF56Q15929 161 aa11.4□□□□□ -0.58
RER1-202ENST00000378512 TOR2AQ5JU69 321 aa11.4□□□□□ -0.58
RER1-202ENST00000378512 RNASE7Q9H1E1 156 aaKnown RBP11.4□□□□□ -0.58
RER1-202ENST00000378512 LYZL1Q6UWQ5 148 aa11.39□□□□□ -0.59
RER1-202ENST00000378512 FAM231DQ6ZW35 169 aa11.39□□□□□ -0.59
RER1-202ENST00000378512 Q8N3U1 123 aa11.39□□□□□ -0.59
RER1-202ENST00000378512 RPP21Q9H633 154 aaKnown RBP11.39□□□□□ -0.59
RER1-202ENST00000378512 A0A087WTM6 91 aa11.38□□□□□ -0.59
RER1-202ENST00000378512 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
RER1-202ENST00000378512 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
RER1-202ENST00000378512 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
RER1-202ENST00000378512 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
RER1-202ENST00000378512 ERVFC1-1P60608 527 aa11.38□□□□□ -0.59
RER1-202ENST00000378512 TEX261Q6UWH6 196 aa11.38□□□□□ -0.59
RER1-202ENST00000378512 Q8N1X5 172 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms