RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 RBM3P98179 157 aaKnown RBP9.32□□□□□ -0.92
PCDHA9-201ENST00000378122 C8orf31Q8N9H6 132 aa9.32□□□□□ -0.92
PCDHA9-201ENST00000378122 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
PCDHA9-201ENST00000378122 KIAA1549LQ6ZVL6 1849 aa9.32□□□□□ -0.92
PCDHA9-201ENST00000378122 FRMD6-AS1P0C7T7 363 aa9.32□□□□□ -0.92
PCDHA9-201ENST00000378122 SMIM20Q8N5G0 67 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 SEM1Q6ZVN7 128 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 GPHB5Q86YW7 130 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 C1orf43Q9BWL3 253 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 OBSL1O75147 1896 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 DNAJC9-AS1A6NH13 148 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 RETNQ9HD89 108 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 KAAG1Q9UBP8 84 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 ACYP1P07311 99 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 SPART-AS1P0CW21 52 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 C5orf38Q86SI9 138 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
PCDHA9-201ENST00000378122 PTPRQQ9UMZ3 2332 aa9.3□□□□□ -0.92
PCDHA9-201ENST00000378122 IGLV2-14P01704 120 aa9.3□□□□□ -0.92
PCDHA9-201ENST00000378122 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.3□□□□□ -0.92
PCDHA9-201ENST00000378122 PRSS47A8MTI9 375 aa9.3□□□□□ -0.92
PCDHA9-201ENST00000378122 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
PCDHA9-201ENST00000378122 MED13LQ71F56 2210 aa9.3□□□□□ -0.92
PCDHA9-201ENST00000378122 EML6Q6ZMW3 1958 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 FOXI1Q12951 378 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 SMR3AQ99954 134 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 A0A0B4J2C4 111 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 CTSGP08311 255 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 A4D1N5 150 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 TMEM258P61165 79 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 ZFP2Q6ZN57 461 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 SHANK1Q9Y566 2161 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 IGHG2P01859 326 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 GYPEP15421 78 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 WNK1Q9H4A3 2382 aa9.29□□□□□ -0.92
PCDHA9-201ENST00000378122 H3BUA1 57 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 ZFHX2Q9C0A1 2572 aaPredicted RBP9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 C19orf84I3L1E1 186 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 K7EIM0 57 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 FAM236AA0A1B0GUQ0 79 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 FAM236BA0A1B0GV22 79 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 ARHGAP21Q5T5U3 1957 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 SPATA25Q9BR10 227 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 CHKB-CPT1BH3BT56 60 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 BLCAPP62952 87 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
PCDHA9-201ENST00000378122 ELANEP08246 267 aa9.27□□□□□ -0.92
PCDHA9-201ENST00000378122 C11orf45Q8TAV5 145 aa9.27□□□□□ -0.92
PCDHA9-201ENST00000378122 FAM167A-AS1Q96KT0 104 aa9.27□□□□□ -0.92
PCDHA9-201ENST00000378122 Q6ZSR3 168 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 COL4A3Q01955 1670 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 PRAC2D3DTV9 90 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 RPL39P62891 51 aaKnown RBP9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 HERV-K104P63124 156 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 LYPD6Q86Y78 171 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 DAND5Q8N907 189 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 C10orf105Q8TEF2 133 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 HIGD1BQ9P298 99 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 TEN1Q86WV5 123 aa9.27□□□□□ -0.93
PCDHA9-201ENST00000378122 IGHV7-81A0A0B4J1V7 117 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 LECT2O14960 151 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 IGLV11-55A0A075B6I3 123 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 WI2-2373I1.2A0A1W2PRP0 233 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 TNRC6BQ9UPQ9 1833 aaKnown RBP9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 IGHV4OR15-8A0A075B7B6 117 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 A0A087WW49 117 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 A0A1B0GX51 115 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 NCR3O14931 201 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 LINC01620Q4KN68 170 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 CLEC2BQ92478 149 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 SHISA2Q6UWI4 295 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 AJUBAQ96IF1 538 aa9.26□□□□□ -0.93
PCDHA9-201ENST00000378122 K7EQD1 137 aa9.25□□□□□ -0.93
PCDHA9-201ENST00000378122 OTOGLQ3ZCN5 2332 aa9.25□□□□□ -0.93
PCDHA9-201ENST00000378122 HRCT1Q6UXD1 115 aa9.25□□□□□ -0.93
PCDHA9-201ENST00000378122 TRAV4A0A0B4J268 109 aa9.25□□□□□ -0.93
PCDHA9-201ENST00000378122 A0A0J9YXV3 536 aa9.25□□□□□ -0.93
PCDHA9-201ENST00000378122 CENPVL3A0A0U1RRI6 287 aa9.25□□□□□ -0.93
PCDHA9-201ENST00000378122 C16orf54Q6UWD8 224 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 E7EUB6 86 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 ODF3L1Q8IXM7 274 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 C11orf1Q9H5F2 150 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 ZNF106Q9H2Y7 1883 aaKnown RBP9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 ETDCA0A1B0GVM5 59 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 LENEPQ9Y5L5 61 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
PCDHA9-201ENST00000378122 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
PCDHA9-201ENST00000378122 LGALS9O00182 355 aa9.23□□□□□ -0.93
PCDHA9-201ENST00000378122 ATOX1O00244 68 aa9.23□□□□□ -0.93
PCDHA9-201ENST00000378122 IGKV1-17P01599 117 aa9.23□□□□□ -0.93
PCDHA9-201ENST00000378122 J3KT08 172 aa9.23□□□□□ -0.93
PCDHA9-201ENST00000378122 C9orf47Q6ZRZ4 202 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 SPATA12Q7Z6I5 190 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 E9PLD3 99 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms