RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
RTN3-206ENST00000377819 IGKV1-6A0A0C4DH72 117 aa8.35□□□□□ -1.07
RTN3-206ENST00000377819 ZC2HC1AQ96GY0 325 aa8.35□□□□□ -1.07
RTN3-206ENST00000377819 AGPAT4-IT1Q9H0P7 198 aa8.35□□□□□ -1.07
RTN3-206ENST00000377819 UBE2D1P51668 147 aa8.35□□□□□ -1.07
RTN3-206ENST00000377819 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
RTN3-206ENST00000377819 LINC00311Q8N616 119 aa8.34□□□□□ -1.07
RTN3-206ENST00000377819 IGHV4-30-2A0A087WSY4 118 aa8.34□□□□□ -1.07
RTN3-206ENST00000377819 Q6ZRM9 215 aa8.34□□□□□ -1.07
RTN3-206ENST00000377819 LYPD3O95274 346 aa8.34□□□□□ -1.07
RTN3-206ENST00000377819 TRIP12Q14669 1992 aaPredicted RBP8.34□□□□□ -1.07
RTN3-206ENST00000377819 ARTNQ5T4W7 220 aa8.34□□□□□ -1.07
RTN3-206ENST00000377819 HIST2H2BDQ6DRA6 164 aa8.34□□□□□ -1.07
RTN3-206ENST00000377819 Q6ZUT4 128 aa8.34□□□□□ -1.07
RTN3-206ENST00000377819 PIKFYVEQ9Y2I7 2098 aa8.34□□□□□ -1.08
RTN3-206ENST00000377819 PCNTO95613 3336 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 NCOR2Q9Y618 2525 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 K7ENP7 123 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 BTCP35070 178 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 UFSP1Q6NVU6 142 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 YLPM1P49750 1951 aaKnown RBP8.33□□□□□ -1.08
RTN3-206ENST00000377819 RBAKDNA6NC62 111 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 IGLC1P0CG04 106 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 DEFB112Q30KQ8 113 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 FAM19A1Q7Z5A9 133 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 LINC00643Q86TS7 51 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 C11orf52Q96A22 123 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 PRO0255Q9UI72 69 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 MUC6Q6W4X9 2439 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 APRG1Q8IVJ8 170 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 ZNF747Q9BV97 191 aa8.33□□□□□ -1.08
RTN3-206ENST00000377819 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 WIPF3A6NGB9 483 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 BPTFQ12830 3046 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 MIR7-3HGQ8N6C7 128 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 A0A0G2JRQ6 117 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 DEFB135Q30KP9 77 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 FOXI1Q12951 378 aa8.32□□□□□ -1.08
RTN3-206ENST00000377819 Q8TCH9 128 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 NLRC5Q86WI3 1866 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 LGALS9O00182 355 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 PTPRDP23468 1912 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 DEFB136Q30KP8 78 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 C5orf24Q7Z6I8 188 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 CYYR1Q96J86 154 aa8.31□□□□□ -1.08
RTN3-206ENST00000377819 IGLV3-9A0A075B6K5 115 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 MYCNOSP40205 109 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 INSL3P51460 131 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 WT1-ASQ06250 92 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 C9orf85Q96MD7 179 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 V9GYV3 84 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 MED14OSP0DP75 135 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 MST1P26927 711 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 C16orf54Q6UWD8 224 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 ZNF833PQ6ZTB9 187 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 ZNRD1Q9P1U0 126 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 MCM3APO60318 1980 aa8.3□□□□□ -1.08
RTN3-206ENST00000377819 IGKV1D-37A0A075B6S9 117 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 UBE2D3P61077 147 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 PCP2Q8IVA1 136 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 DSCAML1Q8TD84 2053 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 RNF144BQ7Z419 303 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 WI2-2373I1.2A0A1W2PRP0 233 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 WFDC10BQ8IUB3 73 aa8.29□□□□□ -1.08
RTN3-206ENST00000377819 LINC00322Q6ZN03 302 aaPredicted RBP8.28□□□□□ -1.08
RTN3-206ENST00000377819 LYRM9A8MSI8 78 aa8.28□□□□□ -1.08
RTN3-206ENST00000377819 FAM120AOSQ5T036 256 aa8.28□□□□□ -1.08
RTN3-206ENST00000377819 DAND5Q8N907 189 aa8.28□□□□□ -1.08
RTN3-206ENST00000377819 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.28□□□□□ -1.08
RTN3-206ENST00000377819 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.08
RTN3-206ENST00000377819 SLURP1P55000 103 aa8.27□□□□□ -1.08
RTN3-206ENST00000377819 JMJD1CQ15652 2540 aa8.27□□□□□ -1.08
RTN3-206ENST00000377819 RETNQ9HD89 108 aa8.27□□□□□ -1.09
RTN3-206ENST00000377819 G3V4G9 280 aa8.27□□□□□ -1.09
RTN3-206ENST00000377819 LTBP2Q14767 1821 aa8.27□□□□□ -1.09
RTN3-206ENST00000377819 DEFB113Q30KQ7 82 aa8.27□□□□□ -1.09
RTN3-206ENST00000377819 Q6ZVQ6 151 aa8.27□□□□□ -1.09
RTN3-206ENST00000377819 A0A087WV48 116 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 QRFPP83859 136 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 PRR30Q53SZ7 412 aaPredicted RBP8.26□□□□□ -1.09
RTN3-206ENST00000377819 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.26□□□□□ -1.09
RTN3-206ENST00000377819 PRSS33Q8NF86 280 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
RTN3-206ENST00000377819 TRBV10-1A0A0K0K1A3 114 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 TCL1BO95988 128 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 PRR4Q16378 134 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 ODF1Q14990 250 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 ATP5EP2Q5VTU8 51 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
RTN3-206ENST00000377819 TANC1Q9C0D5 1861 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms