RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 Q6ZQT7 251 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 NUPR1O60356 82 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 IGHV3-33P01772 117 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 IGHV3-30-3P0DP02 117 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 HAMPP81172 84 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 LYPD6Q86Y78 171 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 ANKRD29Q8N6D5 301 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 I3L3M4 83 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 PFN2P35080 140 aa8.45□□□□□ -1.06
HIF3A-205ENST00000377670 IGHV4OR15-8A0A075B7B6 117 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 A0A087WW49 117 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 RITA1Q96K30 269 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 TRAV12-1A0A0B4J245 112 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 F8VRH5 84 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 SPRY2O43597 315 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 UBL5Q9BZL1 73 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 HLA-DMBP28068 263 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 C11orf52Q96A22 123 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 NDUFA12Q9UI09 145 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 CRLF1O75462 422 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 CRYBA4P53673 196 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 KRTAP27-1Q3LI81 207 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 ZNF503Q96F45 646 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 SDHAF1A6NFY7 115 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
HIF3A-205ENST00000377670 ESM1Q9NQ30 184 aa8.44□□□□□ -1.06
HIF3A-205ENST00000377670 FANCD2OSQ96PS1 177 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 U3KQE9 123 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 TIRAPP58753 221 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 CFHR4Q92496 578 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 FXYD5Q96DB9 178 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 ZNF747Q9BV97 191 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 ARHGAP32A7KAX9 2087 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 TINCRA0A1B0GVN0 87 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 DEFB4AO15263 64 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 IL15RAQ13261 267 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 NAV3Q8IVL0 2385 aa8.43□□□□□ -1.06
HIF3A-205ENST00000377670 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 ZNF493Q6ZR52 646 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 J3QQQ9 107 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 GYPEP15421 78 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 SMIM20Q8N5G0 67 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 SPANXDQ9BXN6 97 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 AJUBAQ96IF1 538 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 H3BRN7 92 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 RBMY1FQ15415 496 aaKnown RBP8.42□□□□□ -1.06
HIF3A-205ENST00000377670 TANC2Q9HCD6 1990 aa8.42□□□□□ -1.06
HIF3A-205ENST00000377670 BOD1L2Q8IYS8 172 aa8.41□□□□□ -1.06
HIF3A-205ENST00000377670 LTAP01374 205 aa8.41□□□□□ -1.06
HIF3A-205ENST00000377670 K7EMI3 77 aa8.41□□□□□ -1.06
HIF3A-205ENST00000377670 TMEM14CQ9P0S9 112 aa8.41□□□□□ -1.06
HIF3A-205ENST00000377670 LY6G6CO95867 125 aa8.41□□□□□ -1.06
HIF3A-205ENST00000377670 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
HIF3A-205ENST00000377670 RNASE13Q5GAN3 156 aaKnown RBP8.4□□□□□ -1.06
HIF3A-205ENST00000377670 LINC00173Q6ZV60 143 aa8.4□□□□□ -1.06
HIF3A-205ENST00000377670 MRPL53Q96EL3 112 aaKnown RBP8.4□□□□□ -1.06
HIF3A-205ENST00000377670 IGHG4P01861 327 aa8.4□□□□□ -1.06
HIF3A-205ENST00000377670 C8orf31Q8N9H6 132 aa8.4□□□□□ -1.06
HIF3A-205ENST00000377670 USP9YO00507 2555 aaPredicted RBP8.4□□□□□ -1.06
HIF3A-205ENST00000377670 NACAE9PAV3 2078 aa8.4□□□□□ -1.06
HIF3A-205ENST00000377670 NXPH4O95158 308 aa8.4□□□□□ -1.06
HIF3A-205ENST00000377670 IGLC1P0CG04 106 aa8.4□□□□□ -1.06
HIF3A-205ENST00000377670 SCRT2Q9NQ03 307 aa8.4□□□□□ -1.06
HIF3A-205ENST00000377670 C5orf56Q8N8D9 126 aa8.4□□□□□ -1.07
HIF3A-205ENST00000377670 TMEM89A2RUT3 159 aa8.39□□□□□ -1.07
HIF3A-205ENST00000377670 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
HIF3A-205ENST00000377670 CFC1P0CG37 223 aa8.39□□□□□ -1.07
HIF3A-205ENST00000377670 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
HIF3A-205ENST00000377670 NUP210LQ5VU65 1888 aa8.39□□□□□ -1.07
HIF3A-205ENST00000377670 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
HIF3A-205ENST00000377670 TNFRSF13BO14836 293 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-205ENST00000377670 BUB3O43684 328 aa8.39□□□□□ -1.07
HIF3A-205ENST00000377670 RBM3P98179 157 aaKnown RBP8.39□□□□□ -1.07
HIF3A-205ENST00000377670 C2orf70A6NJV1 201 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 RNF152Q8N8N0 203 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 C17orf77Q96MU5 243 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 PRR20EP86478 221 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 PRR20CP86479 221 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 PRR20DP86480 221 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 PRR20BP86481 221 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 PRR20AP86496 221 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 SRSF2Q01130 221 aaKnown RBP8.38□□□□□ -1.07
HIF3A-205ENST00000377670 USP9XQ93008 2570 aaPredicted RBP8.38□□□□□ -1.07
HIF3A-205ENST00000377670 XCL1P47992 114 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 C14orf177Q52M58 125 aa8.38□□□□□ -1.07
HIF3A-205ENST00000377670 IGHV7-81A0A0B4J1V7 117 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 NCKAP5O14513 1909 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 ANKRD39Q53RE8 183 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 Q6YL49 198 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 DSCR8Q96T75 97 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms