RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
UBQLN1-202ENST00000376395 FOXI2Q6ZQN5 318 aa11.33□□□□□ -0.6
UBQLN1-202ENST00000376395 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
UBQLN1-202ENST00000376395 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
UBQLN1-202ENST00000376395 HIVEP2P31629 2446 aa11.33□□□□□ -0.6
UBQLN1-202ENST00000376395 RNASE1P07998 156 aaKnown RBP11.33□□□□□ -0.6
UBQLN1-202ENST00000376395 TIMM21Q9BVV7 248 aa11.33□□□□□ -0.6
UBQLN1-202ENST00000376395 MTORP42345 2549 aa11.32□□□□□ -0.6
UBQLN1-202ENST00000376395 IGHV3-38A0A0C4DH36 116 aa11.32□□□□□ -0.6
UBQLN1-202ENST00000376395 J3QQQ9 107 aa11.32□□□□□ -0.6
UBQLN1-202ENST00000376395 PTH2Q96A98 100 aa11.32□□□□□ -0.6
UBQLN1-202ENST00000376395 UBE2E2Q96LR5 201 aa11.32□□□□□ -0.6
UBQLN1-202ENST00000376395 M0R2P5 195 aa11.32□□□□□ -0.6
UBQLN1-202ENST00000376395 IGHV4-38-2P0DP08 117 aa11.32□□□□□ -0.6
UBQLN1-202ENST00000376395 B4DSR2 109 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 TAL2Q16559 108 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 LY6G5BQ8NDX9 201 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 PLEKHB2Q96CS7 222 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 IGHV7-4-1A0A0J9YVY3 117 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 TSPAN13O95857 204 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 OPRPNQ99935 248 aaPredicted RBP11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 G3V4G9 280 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 GAGE2BQ13066 116 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 GAGE2EQ4V326 116 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 GAGE2DQ9UEU5 116 aa11.31□□□□□ -0.6
UBQLN1-202ENST00000376395 TRGV2A0A075B6R0 118 aa11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 MSMBP08118 114 aa11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 ZNF292O60281 2723 aa11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 TRAV13-1A0A0B4J241 112 aa11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 MRPS12O15235 138 aaKnown RBP11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 PRO1854Q9UHT4 67 aa11.3□□□□□ -0.6
UBQLN1-202ENST00000376395 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 TRPT1Q86TN4 253 aaKnown RBP11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 AJUBAQ96IF1 538 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 DNAL4O96015 105 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 PKD1L2Q7Z442 2459 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 IGHV1OR15-1A0A075B7D0 117 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 ODF3BA8MYP8 253 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 C5orf56Q8N8D9 126 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 GATD1Q8NB37 220 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
UBQLN1-202ENST00000376395 TRAV8-3A0A0A6YYJ7 113 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 ZFAND6Q6FIF0 208 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 C16orf54Q6UWD8 224 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 PRR9Q5T870 116 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 NRGNQ92686 78 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 STHQ8IWL8 128 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 JMJD1CQ15652 2540 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 C9orf47Q6ZRZ4 202 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 BAALCQ8WXS3 180 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 ZFAND3Q9H8U3 227 aa11.28□□□□□ -0.6
UBQLN1-202ENST00000376395 DMXL1Q9Y485 3027 aa11.27□□□□□ -0.6
UBQLN1-202ENST00000376395 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.6
UBQLN1-202ENST00000376395 TMEM141Q96I45 108 aa11.27□□□□□ -0.6
UBQLN1-202ENST00000376395 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
UBQLN1-202ENST00000376395 SIRPDQ9H106 197 aa11.27□□□□□ -0.61
UBQLN1-202ENST00000376395 XCL2Q9UBD3 114 aa11.27□□□□□ -0.61
UBQLN1-202ENST00000376395 LENEPQ9Y5L5 61 aa11.27□□□□□ -0.61
UBQLN1-202ENST00000376395 U3KQK5 164 aa11.27□□□□□ -0.61
UBQLN1-202ENST00000376395 PPDPFLQ8WWR9 84 aa11.27□□□□□ -0.61
UBQLN1-202ENST00000376395 ZZEF1O43149 2961 aa11.27□□□□□ -0.61
UBQLN1-202ENST00000376395 ZNF48Q96MX3 618 aaPredicted RBP11.26□□□□□ -0.61
UBQLN1-202ENST00000376395 LRBAP50851 2863 aa11.26□□□□□ -0.61
UBQLN1-202ENST00000376395 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
UBQLN1-202ENST00000376395 ZFP2Q6ZN57 461 aa11.26□□□□□ -0.61
UBQLN1-202ENST00000376395 RASL10AQ92737 203 aa11.26□□□□□ -0.61
UBQLN1-202ENST00000376395 TMEM101Q96IK0 257 aa11.26□□□□□ -0.61
UBQLN1-202ENST00000376395 I3L3M4 83 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 ATXN8Q156A1 80 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 TCTEX1D4Q5JR98 221 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 TRBV20-1A0A075B6N2 111 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 PEMTQ9UBM1 199 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 LGALS1P09382 135 aaKnown RBP11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 C10orf126Q8N4M7 172 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 HHLA3Q9XRX5 114 aa11.25□□□□□ -0.61
UBQLN1-202ENST00000376395 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
UBQLN1-202ENST00000376395 SLC25A20O43772 301 aa11.24□□□□□ -0.61
UBQLN1-202ENST00000376395 DEFB136Q30KP8 78 aa11.24□□□□□ -0.61
UBQLN1-202ENST00000376395 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
UBQLN1-202ENST00000376395 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
UBQLN1-202ENST00000376395 MDFICQ9P1T7 246 aa11.24□□□□□ -0.61
UBQLN1-202ENST00000376395 LAMA5O15230 3695 aa11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 A4D1N5 150 aa11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 ATP6V0BQ99437 205 aa11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 INSL3P51460 131 aa11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 C11orf68Q9H3H3 251 aaKnown RBP11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 PRRC2AP48634 2157 aaKnown RBP11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 TOMM6Q96B49 74 aa11.23□□□□□ -0.61
UBQLN1-202ENST00000376395 E9PLD3 99 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms