RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 APOMO95445 188 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 CRYGDP07320 174 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 RNASE3P12724 160 aaKnown RBP11.41□□□□□ -0.58
MSH5-203ENST00000375750 ASIPP42127 132 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 SMCPP49901 116 aaPredicted RBP11.41□□□□□ -0.58
MSH5-203ENST00000375750 LY6EQ16553 131 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
MSH5-203ENST00000375750 TSHBP01222 138 aa11.4□□□□□ -0.58
MSH5-203ENST00000375750 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.58
MSH5-203ENST00000375750 A0A087WWL8 130 aa11.4□□□□□ -0.58
MSH5-203ENST00000375750 LOC107984156A0A0G2JMH3 177 aa11.4□□□□□ -0.58
MSH5-203ENST00000375750 C11orf86A6NJI1 115 aa11.4□□□□□ -0.58
MSH5-203ENST00000375750 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
MSH5-203ENST00000375750 ARL17AQ8IVW1 177 aa11.4□□□□□ -0.58
MSH5-203ENST00000375750 DOPEY2Q9Y3R5 2298 aa11.4□□□□□ -0.58
MSH5-203ENST00000375750 NAV2Q8IVL1 2488 aa11.4□□□□□ -0.59
MSH5-203ENST00000375750 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.59
MSH5-203ENST00000375750 APCP25054 2843 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 PSMB2P49721 201 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 ZNF418Q8TF45 676 aaPredicted RBP11.39□□□□□ -0.59
MSH5-203ENST00000375750 SORL1Q92673 2214 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 DEFB113Q30KQ7 82 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 Q6ZS46 218 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 LINC01356Q8N9X3 169 aa11.39□□□□□ -0.59
MSH5-203ENST00000375750 SOCS3O14543 225 aa11.38□□□□□ -0.59
MSH5-203ENST00000375750 H3BUX3 64 aa11.38□□□□□ -0.59
MSH5-203ENST00000375750 TSPEAR-AS2P59090 65 aa11.38□□□□□ -0.59
MSH5-203ENST00000375750 KLK9Q2XQG4 91 aa11.38□□□□□ -0.59
MSH5-203ENST00000375750 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
MSH5-203ENST00000375750 KLK9Q9UKQ9 250 aa11.38□□□□□ -0.59
MSH5-203ENST00000375750 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
MSH5-203ENST00000375750 TSPAN13O95857 204 aa11.37□□□□□ -0.59
MSH5-203ENST00000375750 PLA2G2AP14555 144 aa11.37□□□□□ -0.59
MSH5-203ENST00000375750 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
MSH5-203ENST00000375750 IGLV4-69A0A075B6H9 119 aa11.37□□□□□ -0.59
MSH5-203ENST00000375750 OPRPNQ99935 248 aaPredicted RBP11.37□□□□□ -0.59
MSH5-203ENST00000375750 MOB4Q9Y3A3 225 aa11.37□□□□□ -0.59
MSH5-203ENST00000375750 Q5PR19 223 aa11.36□□□□□ -0.59
MSH5-203ENST00000375750 LINC00315P59091 139 aa11.36□□□□□ -0.59
MSH5-203ENST00000375750 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
MSH5-203ENST00000375750 F5H697 171 aa11.35□□□□□ -0.59
MSH5-203ENST00000375750 IGKV3-20P01619 116 aa11.35□□□□□ -0.59
MSH5-203ENST00000375750 GATA3P23771 443 aa11.35□□□□□ -0.59
MSH5-203ENST00000375750 FHL3Q13643 280 aa11.35□□□□□ -0.59
MSH5-203ENST00000375750 J3QKU1 62 aa11.34□□□□□ -0.59
MSH5-203ENST00000375750 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
MSH5-203ENST00000375750 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
MSH5-203ENST00000375750 BEX4Q9NWD9 120 aaPredicted RBP11.34□□□□□ -0.59
MSH5-203ENST00000375750 J3QR89 54 aa11.34□□□□□ -0.59
MSH5-203ENST00000375750 BLCAPP62952 87 aa11.34□□□□□ -0.59
MSH5-203ENST00000375750 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
MSH5-203ENST00000375750 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
MSH5-203ENST00000375750 OVOL1O14753 267 aa11.33□□□□□ -0.59
MSH5-203ENST00000375750 PF4V1P10720 104 aa11.33□□□□□ -0.59
MSH5-203ENST00000375750 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.59
MSH5-203ENST00000375750 SYT8Q8NBV8 401 aa11.33□□□□□ -0.59
MSH5-203ENST00000375750 Q96MF0 132 aa11.33□□□□□ -0.59
MSH5-203ENST00000375750 RHPN1-AS1Q9BWJ2 59 aa11.33□□□□□ -0.59
MSH5-203ENST00000375750 KIF25-AS1Q9Y6Z4 181 aa11.33□□□□□ -0.59
MSH5-203ENST00000375750 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 TRAV12-3A0A0B4J271 114 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 UBE2D1P51668 147 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 ZNF256Q9Y2P7 627 aaPredicted RBP11.33□□□□□ -0.6
MSH5-203ENST00000375750 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 A0A0J9YY99 117 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 A6NDX4 124 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 CD7P09564 240 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 IGHV4-31P0DP07 118 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 FOXI1Q12951 378 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
MSH5-203ENST00000375750 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
MSH5-203ENST00000375750 LINC01619G3V211 115 aa11.32□□□□□ -0.6
MSH5-203ENST00000375750 TRAV12-2A0A075B6T6 113 aa11.32□□□□□ -0.6
MSH5-203ENST00000375750 FAM223BA6NKX1 122 aa11.32□□□□□ -0.6
MSH5-203ENST00000375750 DEFB112Q30KQ8 113 aa11.32□□□□□ -0.6
MSH5-203ENST00000375750 FAM223AQ8IWN6 122 aa11.32□□□□□ -0.6
MSH5-203ENST00000375750 DLX4Q92988 240 aaPredicted RBP11.32□□□□□ -0.6
MSH5-203ENST00000375750 PRRC2AP48634 2157 aaKnown RBP11.31□□□□□ -0.6
MSH5-203ENST00000375750 HELZ2Q9BYK8 2649 aaKnown RBP11.31□□□□□ -0.6
MSH5-203ENST00000375750 CIDEAO60543 219 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 TCL1BO95988 128 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 TEX15Q9BXT5 2789 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 NDUFA4O00483 81 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 LRRC75A-AS1Q8N1F1 130 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 CARD19Q96LW7 228 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 CDIP1Q9H305 208 aa11.31□□□□□ -0.6
MSH5-203ENST00000375750 CFC1BP0CG36 223 aa11.3□□□□□ -0.6
MSH5-203ENST00000375750 CFC1P0CG37 223 aa11.3□□□□□ -0.6
MSH5-203ENST00000375750 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
MSH5-203ENST00000375750 NDUFA11Q86Y39 141 aa11.3□□□□□ -0.6
MSH5-203ENST00000375750 C1QTNF4Q9BXJ3 329 aa11.3□□□□□ -0.6
MSH5-203ENST00000375750 CR1P17927 2039 aa11.3□□□□□ -0.6
MSH5-203ENST00000375750 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
MSH5-203ENST00000375750 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 MT-ATP8P03928 68 aa11.29□□□□□ -0.6
MSH5-203ENST00000375750 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms