RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 SRSF3P84103 164 aaKnown RBP10.93□□□□□ -0.66
C11orf88-202ENST00000375618 RHOHQ15669 191 aa10.93□□□□□ -0.66
C11orf88-202ENST00000375618 FAM74A4Q5TZK3 123 aa10.93□□□□□ -0.66
C11orf88-202ENST00000375618 RNASE7Q9H1E1 156 aaKnown RBP10.93□□□□□ -0.66
C11orf88-202ENST00000375618 BIRC6Q9NR09 4857 aa10.93□□□□□ -0.66
C11orf88-202ENST00000375618 DNAH17Q9UFH2 4485 aa10.92□□□□□ -0.66
C11orf88-202ENST00000375618 P01737 135 aa10.92□□□□□ -0.66
C11orf88-202ENST00000375618 DAZAP1Q96EP5 407 aaKnown RBP10.92□□□□□ -0.66
C11orf88-202ENST00000375618 PRADC1Q9BSG0 188 aa10.92□□□□□ -0.66
C11orf88-202ENST00000375618 NDUFS6O75380 124 aaKnown RBP10.91□□□□□ -0.66
C11orf88-202ENST00000375618 WFDC10BQ8IUB3 73 aa10.91□□□□□ -0.66
C11orf88-202ENST00000375618 FER1L6-AS1Q8NA97 138 aa10.91□□□□□ -0.66
C11orf88-202ENST00000375618 MSRB1Q9NZV6 116 aa10.91□□□□□ -0.66
C11orf88-202ENST00000375618 FAT2Q9NYQ8 4349 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 GAGE12JA6NER3 117 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 RHODO00212 210 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 RPS20P60866 119 aaKnown RBP10.9□□□□□ -0.66
C11orf88-202ENST00000375618 GAGE1Q13065 139 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 GAGE4Q13068 117 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 GAGE5Q13069 117 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 GAGE13Q4V321 117 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 TPPP3Q9BW30 176 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
C11orf88-202ENST00000375618 LINC00315P59091 139 aa10.89□□□□□ -0.67
C11orf88-202ENST00000375618 SPANXN1Q5VSR9 72 aa10.89□□□□□ -0.67
C11orf88-202ENST00000375618 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
C11orf88-202ENST00000375618 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
C11orf88-202ENST00000375618 BIN3Q9NQY0 253 aa10.89□□□□□ -0.67
C11orf88-202ENST00000375618 SIVA1O15304 175 aa10.88□□□□□ -0.67
C11orf88-202ENST00000375618 LYZL1Q6UWQ5 148 aa10.88□□□□□ -0.67
C11orf88-202ENST00000375618 LINC01551Q86U37 167 aa10.88□□□□□ -0.67
C11orf88-202ENST00000375618 A0A1B0GVY2 172 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 ZNF727A8MUV8 499 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 TIRAPP58753 221 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 C1orf134Q5TEV5 83 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 ATP6V0E2Q8NHE4 81 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 GTSF1Q8WW33 167 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
C11orf88-202ENST00000375618 CTRLP40313 264 aa10.86□□□□□ -0.67
C11orf88-202ENST00000375618 FAM231DQ6ZW35 169 aa10.86□□□□□ -0.67
C11orf88-202ENST00000375618 C6orf223Q8N319 242 aa10.86□□□□□ -0.67
C11orf88-202ENST00000375618 PRSS29PA6NIE9 313 aa10.85□□□□□ -0.67
C11orf88-202ENST00000375618 IFITM2Q01629 132 aa10.85□□□□□ -0.67
C11orf88-202ENST00000375618 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
C11orf88-202ENST00000375618 TNFRSF18Q9Y5U5 241 aa10.85□□□□□ -0.67
C11orf88-202ENST00000375618 XKRY2A2RUG3 117 aa10.84□□□□□ -0.67
C11orf88-202ENST00000375618 GATCO43716 136 aaKnown RBP10.84□□□□□ -0.67
C11orf88-202ENST00000375618 RAB4BP61018 213 aa10.84□□□□□ -0.67
C11orf88-202ENST00000375618 CACNG7P62955 275 aa10.84□□□□□ -0.67
C11orf88-202ENST00000375618 ZNF56Q15929 161 aa10.84□□□□□ -0.67
C11orf88-202ENST00000375618 TTC32Q5I0X7 151 aa10.84□□□□□ -0.67
C11orf88-202ENST00000375618 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
C11orf88-202ENST00000375618 HECTD4Q9Y4D8 3996 aa10.84□□□□□ -0.67
C11orf88-202ENST00000375618 A0A1W2PPQ1 181 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 F2Z2F3 143 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 DNAH10OSP0CZ25 163 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 NTF3P20783 257 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 EVI2AP22794 236 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 TNP2Q05952 138 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 PEA15Q15121 130 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 Q8N3U1 123 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 AP1S3Q96PC3 154 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 CNFNQ9BYD5 112 aa10.83□□□□□ -0.68
C11orf88-202ENST00000375618 ERVFC1-1P60608 527 aa10.82□□□□□ -0.68
C11orf88-202ENST00000375618 RPL23P62829 140 aaKnown RBP10.82□□□□□ -0.68
C11orf88-202ENST00000375618 LELP1Q5T871 98 aa10.82□□□□□ -0.68
C11orf88-202ENST00000375618 Q6ZRN7 208 aaPredicted RBP10.82□□□□□ -0.68
C11orf88-202ENST00000375618 NEXN-AS1Q8NBZ9 246 aa10.82□□□□□ -0.68
C11orf88-202ENST00000375618 ISOC2Q96AB3 205 aa10.82□□□□□ -0.68
C11orf88-202ENST00000375618 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
C11orf88-202ENST00000375618 KRTAP3-2Q9BYR7 98 aa10.82□□□□□ -0.68
C11orf88-202ENST00000375618 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
C11orf88-202ENST00000375618 UBE2D3P61077 147 aa10.81□□□□□ -0.68
C11orf88-202ENST00000375618 UBE2D2P62837 147 aa10.81□□□□□ -0.68
C11orf88-202ENST00000375618 TMEM241Q24JQ0 296 aa10.81□□□□□ -0.68
C11orf88-202ENST00000375618 OR10G8Q8NGN5 311 aa10.81□□□□□ -0.68
C11orf88-202ENST00000375618 IGHV3-38A0A0C4DH36 116 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 F5H697 171 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 MGPP08493 103 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 FOXA3P55318 350 aaPredicted RBP10.8□□□□□ -0.68
C11orf88-202ENST00000375618 FAM74A3Q4VXF1 159 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 CT83Q5H943 113 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 OR10J3Q5JRS4 329 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 SOHLH1Q5JUK2 328 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 WDR73Q6P4I2 378 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 V9GYV3 84 aa10.8□□□□□ -0.68
C11orf88-202ENST00000375618 TRBV7-3A0A075B6L6 115 aa10.79□□□□□ -0.68
C11orf88-202ENST00000375618 M0QY20 66 aa10.79□□□□□ -0.68
C11orf88-202ENST00000375618 SMIM17P0DL12 118 aa10.79□□□□□ -0.68
C11orf88-202ENST00000375618 RPL36AP83881 106 aaKnown RBP10.79□□□□□ -0.68
C11orf88-202ENST00000375618 SUMO4Q6EEV6 95 aa10.79□□□□□ -0.68
C11orf88-202ENST00000375618 RPL36ALQ969Q0 106 aaKnown RBP10.79□□□□□ -0.68
C11orf88-202ENST00000375618 SMDT1Q9H4I9 107 aa10.79□□□□□ -0.68
C11orf88-202ENST00000375618 PKD1P98161 4303 aa10.79□□□□□ -0.68
C11orf88-202ENST00000375618 A8MWL6 223 aa10.78□□□□□ -0.68
C11orf88-202ENST00000375618 TWIST1Q15672 202 aa10.78□□□□□ -0.68
C11orf88-202ENST00000375618 ADIRFQ15847 76 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms