RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZNF292O60281 2723 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 RS1O15537 224 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 LENEPQ9Y5L5 61 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 C22orf46C9J442 243 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 WISP2O76076 250 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 SPRNQ5BIV9 151 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 Q9H8V8 135 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 NCKAP5O14513 1909 aa9.62□□□□□ -0.87
NPLOC4-202ENST00000374747 CHD3Q12873 2000 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-202ENST00000374747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.61□□□□□ -0.878e-7■■■■□ 20.8
NPLOC4-202ENST00000374747 AGPAT4-IT1Q9H0P7 198 aa9.61□□□□□ -0.87
NPLOC4-202ENST00000374747 PLA2G5P39877 138 aa9.61□□□□□ -0.87
NPLOC4-202ENST00000374747 FAM208BQ5VWN6 2430 aa9.61□□□□□ -0.87
NPLOC4-202ENST00000374747 PRSS47A8MTI9 375 aa9.61□□□□□ -0.87
NPLOC4-202ENST00000374747 FOXI2Q6ZQN5 318 aa9.61□□□□□ -0.87
NPLOC4-202ENST00000374747 hADV29S1A0JD25 119 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 HERV-K104P63124 156 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 FOXE3Q13461 319 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 DAZAP2Q15038 168 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 SLC25A29Q8N8R3 303 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 NUPR1O60356 82 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 GNRH2O43555 120 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 ANGP03950 147 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 AKAP13Q12802 2813 aa9.6□□□□□ -0.87
NPLOC4-202ENST00000374747 PLXNB1O43157 2135 aa9.59□□□□□ -0.87
NPLOC4-202ENST00000374747 CR1LQ2VPA4 569 aa9.59□□□□□ -0.87
NPLOC4-202ENST00000374747 COL5A1P20908 1838 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-202ENST00000374747 H3BUA1 57 aa9.59□□□□□ -0.87
NPLOC4-202ENST00000374747 GATA1P15976 413 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-202ENST00000374747 SPENQ96T58 3664 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-202ENST00000374747 TDRG1Q3Y452 100 aa9.58□□□□□ -0.88
NPLOC4-202ENST00000374747 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
NPLOC4-202ENST00000374747 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
NPLOC4-202ENST00000374747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-202ENST00000374747 IGKV2-29A2NJV5 120 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-202ENST00000374747 NCOR2Q9Y618 2525 aa9.58□□□□□ -0.88
NPLOC4-202ENST00000374747 APOC4P55056 127 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 PRORYQ9H606 182 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 F6UB75 175 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 RMI2Q96E14 147 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 ELANEP08246 267 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 GP9P14770 177 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 HOXB4P17483 251 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 SMIM20Q8N5G0 67 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 RNASE8Q8TDE3 154 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 IGF2BP2-AS1Q96M15 143 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 ACACBO00763 2458 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 RELNP78509 3460 aa9.57□□□□□ -0.88
NPLOC4-202ENST00000374747 ATOX1O00244 68 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 XCL1P47992 114 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 HIGD1BQ9P298 99 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 ANKHD1Q8IWZ3 2542 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 COL12A1Q99715 3063 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 IGF2RP11717 2491 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 A4D1N5 150 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 H0YGX0 51 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 PRB1P04280 392 aa9.56□□□□□ -0.88
NPLOC4-202ENST00000374747 A0A096LPF7 62 aa9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 MUSTN1Q8IVN3 82 aa9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 FXYD2P54710 66 aa9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 RPL39LQ96EH5 51 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 U3KQE9 123 aa9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 LINC01620Q4KN68 170 aa9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 CHD8Q9HCK8 2581 aa9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 PIEZO1Q92508 2521 aa9.55□□□□□ -0.88
NPLOC4-202ENST00000374747 MSMPQ1L6U9 139 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 SPG11Q96JI7 2443 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 NAV3Q8IVL0 2385 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 IGHG2P01859 326 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 WFDC2Q14508 124 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 ADAMTS20P59510 1910 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 PTPRQQ9UMZ3 2332 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 IGHV4-61A0A0C4DH41 118 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 DEFB113Q30KQ7 82 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 SPTBN4Q9H254 2564 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
NPLOC4-202ENST00000374747 FAM236AA0A1B0GUQ0 79 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 FAM236BA0A1B0GV22 79 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 CREBBPQ92793 2442 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 NOP10Q9NPE3 64 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 NOTCH3Q9UM47 2321 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 A0A0J9YXV3 536 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 A0A1B0GX51 115 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 C10orf105Q8TEF2 133 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 FUSP35637 526 aaKnown RBP eCLIP9.53□□□□□ -0.887e-7■■□□□ 11.7
NPLOC4-202ENST00000374747 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 SND1-IT1Q9HBX3 110 aa9.53□□□□□ -0.88
NPLOC4-202ENST00000374747 LRBAP50851 2863 aa9.52□□□□□ -0.88
NPLOC4-202ENST00000374747 FOXI1Q12951 378 aa9.52□□□□□ -0.88
NPLOC4-202ENST00000374747 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.88
NPLOC4-202ENST00000374747 I3L2K1 104 aa9.52□□□□□ -0.89
NPLOC4-202ENST00000374747 J3KT08 172 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms