RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 TRAV21A0A0B4J279 112 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 PHLDA3Q9Y5J5 127 aa13.74□□□□□ -0.21
RXRB-202ENST00000374685 BRI3O95415 125 aa13.73□□□□□ -0.21
RXRB-202ENST00000374685 KRTAP1-3Q8IUG1 177 aa13.73□□□□□ -0.21
RXRB-202ENST00000374685 C14orf178Q8N769 122 aaPredicted RBP13.73□□□□□ -0.21
RXRB-202ENST00000374685 DCANP1Q8TF63 244 aa13.73□□□□□ -0.21
RXRB-202ENST00000374685 PHLDA1Q8WV24 401 aaPredicted RBP13.73□□□□□ -0.21
RXRB-202ENST00000374685 MGPP08493 103 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 JMJD1CQ15652 2540 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 OR11H12B2RN74 326 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 ID1P41134 155 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 SRSF2Q01130 221 aaKnown RBP13.72□□□□□ -0.21
RXRB-202ENST00000374685 OR11H1Q8NG94 326 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 OR11H2Q8NH07 326 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 CNFNQ9BYD5 112 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 FSHBP01225 129 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 LEPP41159 167 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 CACNG7P62955 275 aa13.72□□□□□ -0.21
RXRB-202ENST00000374685 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.21
RXRB-202ENST00000374685 ASIPP42127 132 aa13.71□□□□□ -0.21
RXRB-202ENST00000374685 ZNF418Q8TF45 676 aaPredicted RBP13.71□□□□□ -0.21
RXRB-202ENST00000374685 HBDP02042 147 aa13.71□□□□□ -0.22
RXRB-202ENST00000374685 HTN1P15515 57 aa13.71□□□□□ -0.22
RXRB-202ENST00000374685 GCN1Q92616 2671 aaKnown RBP13.71□□□□□ -0.22
RXRB-202ENST00000374685 A0A1W2PRX2 142 aa13.7□□□□□ -0.22
RXRB-202ENST00000374685 PCP2Q8IVA1 136 aa13.7□□□□□ -0.22
RXRB-202ENST00000374685 HIGD1BQ9P298 99 aa13.7□□□□□ -0.22
RXRB-202ENST00000374685 E9PLD3 99 aa13.7□□□□□ -0.22
RXRB-202ENST00000374685 FXYD2P54710 66 aa13.7□□□□□ -0.22
RXRB-202ENST00000374685 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
RXRB-202ENST00000374685 K7EMT4 169 aa13.69□□□□□ -0.22
RXRB-202ENST00000374685 SPINK13Q1W4C9 94 aa13.69□□□□□ -0.22
RXRB-202ENST00000374685 ETDBQ3ZM63 59 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 SH2D6Q7Z4S9 175 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 SNRPD3P62318 126 aaKnown RBP13.68□□□□□ -0.22
RXRB-202ENST00000374685 FAM159AQ6UWV7 190 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 JPT2Q9H910 190 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 LENEPQ9Y5L5 61 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 ELANEP08246 267 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 CD7P09564 240 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 GCSHP23434 173 aa13.68□□□□□ -0.22
RXRB-202ENST00000374685 IFI27L1Q96BM0 104 aa13.67□□□□□ -0.22
RXRB-202ENST00000374685 MUC4Q99102 2169 aa13.67□□□□□ -0.22
RXRB-202ENST00000374685 LRRC75A-AS1Q8N1F1 130 aa13.67□□□□□ -0.22
RXRB-202ENST00000374685 TMEM158Q8WZ71 300 aa13.67□□□□□ -0.22
RXRB-202ENST00000374685 ZNF479Q96JC4 524 aa13.67□□□□□ -0.22
RXRB-202ENST00000374685 UBE2E2Q96LR5 201 aa13.67□□□□□ -0.22
RXRB-202ENST00000374685 PDZD2O15018 2839 aa13.66□□□□□ -0.22
RXRB-202ENST00000374685 NMUP48645 174 aa13.66□□□□□ -0.22
RXRB-202ENST00000374685 RPL39LQ96EH5 51 aaKnown RBP13.66□□□□□ -0.22
RXRB-202ENST00000374685 K7ERJ3 54 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 PRSS1P07477 247 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 KLHL30-AS1Q8NEE0 82 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 DKK2Q9UBU2 259 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 AKAP9Q99996 3911 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 A0A087WWL8 130 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 TM2D2Q9BX73 214 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 CYSLTR1Q9Y271 337 aa13.65□□□□□ -0.22
RXRB-202ENST00000374685 KNCNA6PVL3 124 aa13.64□□□□□ -0.23
RXRB-202ENST00000374685 IGLL5B9A064 214 aa13.64□□□□□ -0.23
RXRB-202ENST00000374685 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
RXRB-202ENST00000374685 FAM74A4Q5TZK3 123 aa13.64□□□□□ -0.23
RXRB-202ENST00000374685 ZNF580Q9UK33 172 aa13.64□□□□□ -0.23
RXRB-202ENST00000374685 ERG28Q9UKR5 140 aa13.64□□□□□ -0.23
RXRB-202ENST00000374685 INSL3P51460 131 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 NRACQ8N912 160 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 FAM19A4Q96LR4 140 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 NXT2Q9NPJ8 142 aaKnown RBP13.63□□□□□ -0.23
RXRB-202ENST00000374685 HIVEP2P31629 2446 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 H3BMG7 143 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 K7EQG2 157 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 GAGE13Q4V321 117 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 CHAC1Q9BUX1 264 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 CDIP1Q9H305 208 aa13.63□□□□□ -0.23
RXRB-202ENST00000374685 F5H697 171 aa13.62□□□□□ -0.23
RXRB-202ENST00000374685 PRM2P04554 102 aa13.62□□□□□ -0.23
RXRB-202ENST00000374685 SPINK8P0C7L1 97 aa13.62□□□□□ -0.23
RXRB-202ENST00000374685 YAE1D1Q9NRH1 226 aa13.62□□□□□ -0.23
RXRB-202ENST00000374685 C20orf78Q9BR46 151 aa13.62□□□□□ -0.23
RXRB-202ENST00000374685 NHP2Q9NX24 153 aaKnown RBP13.62□□□□□ -0.23
RXRB-202ENST00000374685 A0A0J9YX75 114 aa13.61□□□□□ -0.23
RXRB-202ENST00000374685 TMEM89A2RUT3 159 aa13.61□□□□□ -0.23
RXRB-202ENST00000374685 DNAJC9-AS1A6NH13 148 aa13.61□□□□□ -0.23
RXRB-202ENST00000374685 DEFB131AP59861 70 aa13.61□□□□□ -0.23
RXRB-202ENST00000374685 MDFICQ9P1T7 246 aa13.61□□□□□ -0.23
RXRB-202ENST00000374685 RNF183Q96D59 192 aa13.61□□□□□ -0.23
RXRB-202ENST00000374685 KLLNB2CW77 178 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 J3QKU1 62 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 CEND1Q8N111 149 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 FOXC2Q99958 501 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 PLA2G2AP14555 144 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 Q6ZSV7 163 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 Q8N8P6 123 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 DLX4Q92988 240 aaPredicted RBP13.6□□□□□ -0.23
RXRB-202ENST00000374685 DPH3P1Q9H4G8 78 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 SS18L2Q9UHA2 77 aa13.6□□□□□ -0.23
RXRB-202ENST00000374685 FCER1GP30273 86 aa13.59□□□□□ -0.23
RXRB-202ENST00000374685 ATP6V0E2Q8NHE4 81 aa13.59□□□□□ -0.23
RXRB-202ENST00000374685 ESM1Q9NQ30 184 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms