RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 WFDC2Q14508 124 aa8.53□□□□□ -1.04
PTPN20-204ENST00000374346 FAM74A4Q5TZK3 123 aa8.53□□□□□ -1.04
PTPN20-204ENST00000374346 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
PTPN20-204ENST00000374346 IGLV4-69A0A075B6H9 119 aa8.53□□□□□ -1.04
PTPN20-204ENST00000374346 TMEM89A2RUT3 159 aa8.53□□□□□ -1.04
PTPN20-204ENST00000374346 PSMB8P28062 276 aa8.53□□□□□ -1.04
PTPN20-204ENST00000374346 TSHBP01222 138 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 ZNF56Q15929 161 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 TMEM170BQ5T4T1 132 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 AMTNQ6UX39 209 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 DLX4Q92988 240 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-204ENST00000374346 C9orf85Q96MD7 179 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 JPT2Q9H910 190 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 IGHV3-16A0A0C4DH30 117 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 ZNF688P0C7X2 276 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 RHOHQ15669 191 aa8.52□□□□□ -1.05
PTPN20-204ENST00000374346 TRPT1Q86TN4 253 aaKnown RBP8.52□□□□□ -1.05
PTPN20-204ENST00000374346 DSCR9P59020 149 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 RPL39P62891 51 aaKnown RBP8.51□□□□□ -1.05
PTPN20-204ENST00000374346 ETDBQ3ZM63 59 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 ZNF876PQ49A33 203 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 MORN3Q6PF18 240 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-204ENST00000374346 KLHL30-AS1Q8NEE0 82 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 SIGMAR1Q99720 223 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 A0A0J9YX75 114 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 UBE2D1P51668 147 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
PTPN20-204ENST00000374346 ZNF256Q9Y2P7 627 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-204ENST00000374346 IGHV1OR15-1A0A075B7D0 117 aa8.5□□□□□ -1.05
PTPN20-204ENST00000374346 A0A0J9YY99 117 aa8.5□□□□□ -1.05
PTPN20-204ENST00000374346 TMEM238C9JI98 176 aa8.5□□□□□ -1.05
PTPN20-204ENST00000374346 LGALS3P17931 250 aaKnown RBP8.5□□□□□ -1.05
PTPN20-204ENST00000374346 EMP1P54849 157 aa8.5□□□□□ -1.05
PTPN20-204ENST00000374346 NSUN5P1Q3KNT7 163 aa8.5□□□□□ -1.05
PTPN20-204ENST00000374346 Q8N1Y9 231 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 LOC107984156A0A0G2JMH3 177 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 M0QY20 66 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 EDN2P20800 178 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 ARL17AQ8IVW1 177 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
PTPN20-204ENST00000374346 TRGV11A0A075B6L2 103 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 TRAV12-2A0A075B6T6 113 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 I3L3M4 83 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 K7EQG2 157 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 APOMO95445 188 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 TMEM95Q3KNT9 176 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 SH2D6Q7Z4S9 175 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 SLC25A29Q8N8R3 303 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 PRO0461Q9UI25 63 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 J3QQQ9 107 aa8.48□□□□□ -1.05
PTPN20-204ENST00000374346 TSSC4Q9Y5U2 329 aaPredicted RBP8.48□□□□□ -1.05
PTPN20-204ENST00000374346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPN20-204ENST00000374346 TRBV20-1A0A075B6N2 111 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 TSPAN13O95857 204 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 AVPP01185 164 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 SPINK13Q1W4C9 94 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 NDUFA11Q86Y39 141 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 IGHV4-59P01825 116 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 PSMB2P49721 201 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 DEFB104AQ8WTQ1 72 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 SPAG8Q99932 426 aaPredicted RBP8.47□□□□□ -1.05
PTPN20-204ENST00000374346 SPTBN4Q9H254 2564 aa8.47□□□□□ -1.05
PTPN20-204ENST00000374346 IGHV3-30P01768 117 aa8.46□□□□□ -1.05
PTPN20-204ENST00000374346 IGHV3-30-5P0DP03 117 aa8.46□□□□□ -1.05
PTPN20-204ENST00000374346 DEFB112Q30KQ8 113 aa8.46□□□□□ -1.05
PTPN20-204ENST00000374346 LINC01356Q8N9X3 169 aa8.46□□□□□ -1.05
PTPN20-204ENST00000374346 SPATA25Q9BR10 227 aa8.46□□□□□ -1.05
PTPN20-204ENST00000374346 NCOR2Q9Y618 2525 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 J3QLI3 93 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 AZU1P20160 251 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 SYNJ2BPP57105 145 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 UBE2D3P61077 147 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 UBE2D2P62837 147 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 CFAP126Q5VTH2 177 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 MTURNQ8N3F0 131 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 C20orf203Q8NBC4 194 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 GTSF1LQ9H1H1 148 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 VCX2Q9H322 139 aa8.46□□□□□ -1.06
PTPN20-204ENST00000374346 LEPROTO15243 131 aa8.45□□□□□ -1.06
PTPN20-204ENST00000374346 ELANEP08246 267 aa8.45□□□□□ -1.06
PTPN20-204ENST00000374346 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
PTPN20-204ENST00000374346 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
PTPN20-204ENST00000374346 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
PTPN20-204ENST00000374346 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 RNF152Q8N8N0 203 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 VPS13CQ709C8 3753 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 SCGB1C2P0DMR2 95 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 FOXI1Q12951 378 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 UBE2E2Q96LR5 201 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 CHD8Q9HCK8 2581 aa8.44□□□□□ -1.06
PTPN20-204ENST00000374346 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms