RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ICOSQ9Y6W8 199 aa11.11□□□□□ -0.63
HDHD3-202ENST00000374180 OR5AL1P0C617 328 aa11.1□□□□□ -0.63
HDHD3-202ENST00000374180 GATA1P15976 413 aaPredicted RBP11.1□□□□□ -0.63
HDHD3-202ENST00000374180 RAB5AP20339 215 aa11.1□□□□□ -0.63
HDHD3-202ENST00000374180 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
HDHD3-202ENST00000374180 SSBP4Q9BWG4 385 aaPredicted RBP11.1□□□□□ -0.63
HDHD3-202ENST00000374180 RNASE7Q9H1E1 156 aaKnown RBP11.1□□□□□ -0.63
HDHD3-202ENST00000374180 LY96Q9Y6Y9 160 aa11.1□□□□□ -0.63
HDHD3-202ENST00000374180 DNAH6Q9C0G6 4158 aa11.09□□□□□ -0.63
HDHD3-202ENST00000374180 SNAI2O43623 268 aa11.09□□□□□ -0.63
HDHD3-202ENST00000374180 S100A6P06703 90 aa11.09□□□□□ -0.63
HDHD3-202ENST00000374180 GZMBP10144 247 aa11.09□□□□□ -0.63
HDHD3-202ENST00000374180 GYPEP15421 78 aa11.09□□□□□ -0.63
HDHD3-202ENST00000374180 ZFP2Q6ZN57 461 aa11.09□□□□□ -0.63
HDHD3-202ENST00000374180 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
HDHD3-202ENST00000374180 MUC21A0A0G2JKD1 596 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 MUC21A0A140T8X8 626 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 FAM3BP58499 235 aaPredicted RBP11.08□□□□□ -0.64
HDHD3-202ENST00000374180 SSTP61278 116 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 LINC00518Q8N0U6 118 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 SFRP2Q96HF1 295 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 TPPP3Q9BW30 176 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 SAMD10Q9BYL1 202 aa11.08□□□□□ -0.64
HDHD3-202ENST00000374180 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
HDHD3-202ENST00000374180 K7EQD1 137 aa11.07□□□□□ -0.64
HDHD3-202ENST00000374180 ESRGQ1W209 222 aa11.07□□□□□ -0.64
HDHD3-202ENST00000374180 SLC25A29Q8N8R3 303 aa11.07□□□□□ -0.64
HDHD3-202ENST00000374180 FER1L6-AS1Q8NA97 138 aa11.07□□□□□ -0.64
HDHD3-202ENST00000374180 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
HDHD3-202ENST00000374180 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
HDHD3-202ENST00000374180 A0A087WWL8 130 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 RHODO00212 210 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 IGLC6P0CF74 106 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 SRIP30626 198 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 TMEM241Q24JQ0 296 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 NEGR1Q7Z3B1 354 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 NAT8Q9UHE5 227 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 A0A1W2PPQ1 181 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 NXPH4O95158 308 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 AKR1D1P51857 326 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 RHOHQ15669 191 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 UFSP1Q6NVU6 142 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 Q6ZSN1 163 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 ISOC2Q96AB3 205 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
HDHD3-202ENST00000374180 F2Z2F3 143 aa11.05□□□□□ -0.64
HDHD3-202ENST00000374180 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
HDHD3-202ENST00000374180 CRYGDP07320 174 aa11.05□□□□□ -0.64
HDHD3-202ENST00000374180 S100A8P05109 93 aa11.04□□□□□ -0.64
HDHD3-202ENST00000374180 LYZL1Q6UWQ5 148 aa11.04□□□□□ -0.64
HDHD3-202ENST00000374180 YPEL4Q96NS1 127 aa11.04□□□□□ -0.64
HDHD3-202ENST00000374180 IGLV2-18A0A075B6J9 118 aa11.03□□□□□ -0.64
HDHD3-202ENST00000374180 C5orf52A6NGY3 159 aa11.03□□□□□ -0.64
HDHD3-202ENST00000374180 CACNG7P62955 275 aa11.03□□□□□ -0.64
HDHD3-202ENST00000374180 LYPD5Q6UWN5 251 aa11.03□□□□□ -0.64
HDHD3-202ENST00000374180 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
HDHD3-202ENST00000374180 ZNRF2Q8NHG8 242 aa11.03□□□□□ -0.64
HDHD3-202ENST00000374180 A8MWL6 223 aa11.02□□□□□ -0.65
HDHD3-202ENST00000374180 M0R2N4 97 aa11.02□□□□□ -0.65
HDHD3-202ENST00000374180 C14orf178Q8N769 122 aaPredicted RBP11.02□□□□□ -0.65
HDHD3-202ENST00000374180 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
HDHD3-202ENST00000374180 SMIM17P0DL12 118 aa11.01□□□□□ -0.65
HDHD3-202ENST00000374180 SNRPEP62304 92 aaKnown RBP11.01□□□□□ -0.65
HDHD3-202ENST00000374180 RPL23P62829 140 aaKnown RBP11.01□□□□□ -0.65
HDHD3-202ENST00000374180 AP1S3Q96PC3 154 aa11.01□□□□□ -0.65
HDHD3-202ENST00000374180 Q9H8V8 135 aa11.01□□□□□ -0.65
HDHD3-202ENST00000374180 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
HDHD3-202ENST00000374180 CTRLP40313 264 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
HDHD3-202ENST00000374180 ELOBQ15370 118 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 ADIRFQ15847 76 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 CT83Q5H943 113 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 WDR73Q6P4I2 378 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 GTSF1Q8WW33 167 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 UPK3BQ9BT76 320 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 MSRB1Q9NZV6 116 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 NTF3P20783 257 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 RAB4BP61018 213 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 ZNF56Q15929 161 aa11□□□□□ -0.65
HDHD3-202ENST00000374180 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
HDHD3-202ENST00000374180 F5H697 171 aa10.99□□□□□ -0.65
HDHD3-202ENST00000374180 GAGE1Q13065 139 aa10.99□□□□□ -0.65
HDHD3-202ENST00000374180 GAGE4Q13068 117 aa10.99□□□□□ -0.65
HDHD3-202ENST00000374180 GAGE5Q13069 117 aa10.99□□□□□ -0.65
HDHD3-202ENST00000374180 GAGE13Q4V321 117 aa10.99□□□□□ -0.65
HDHD3-202ENST00000374180 Q9UF83 564 aa10.99□□□□□ -0.65
HDHD3-202ENST00000374180 TRGC1P0CF51 173 aa10.98□□□□□ -0.65
HDHD3-202ENST00000374180 SMIM6P0DI80 62 aa10.98□□□□□ -0.65
HDHD3-202ENST00000374180 TWIST1Q15672 202 aa10.98□□□□□ -0.65
HDHD3-202ENST00000374180 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
HDHD3-202ENST00000374180 C12orf57Q99622 126 aa10.98□□□□□ -0.65
HDHD3-202ENST00000374180 CNFNQ9BYD5 112 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms