RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 C9JAW5 83 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 GNRH2O43555 120 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 HERVK_113P61574 105 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 TRBV20-1A0A075B6N2 111 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 A0A1W2PPR1 153 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 ASIPP42127 132 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 PKD1L2Q7Z442 2459 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 FAM110DQ8TAY7 271 aaPredicted RBP11.97□□□□□ -0.49
PABPC4-202ENST00000372857 VCX2Q9H322 139 aa11.97□□□□□ -0.49
PABPC4-202ENST00000372857 PRO1854Q9UHT4 67 aa11.96□□□□□ -0.49
PABPC4-202ENST00000372857 CSPG4Q6UVK1 2322 aa11.96□□□□□ -0.49
PABPC4-202ENST00000372857 SLC25A20O43772 301 aa11.96□□□□□ -0.5
PABPC4-202ENST00000372857 SBSPONQ8IVN8 264 aa11.96□□□□□ -0.5
PABPC4-202ENST00000372857 ZFAND2AQ8N6M9 145 aa11.96□□□□□ -0.5
PABPC4-202ENST00000372857 CFAP46Q8IYW2 2715 aa11.96□□□□□ -0.5
PABPC4-202ENST00000372857 MUC4Q99102 2169 aa11.95□□□□□ -0.5
PABPC4-202ENST00000372857 GPHB5Q86YW7 130 aa11.95□□□□□ -0.5
PABPC4-202ENST00000372857 IGHV3OR16-10A0A075B7F0 116 aa11.95□□□□□ -0.5
PABPC4-202ENST00000372857 RNASE4P34096 147 aaKnown RBP11.95□□□□□ -0.5
PABPC4-202ENST00000372857 MYO18BQ8IUG5 2567 aa11.95□□□□□ -0.5
PABPC4-202ENST00000372857 M0R1W7 72 aa11.95□□□□□ -0.5
PABPC4-202ENST00000372857 MRPL53Q96EL3 112 aaKnown RBP11.95□□□□□ -0.5
PABPC4-202ENST00000372857 IGKV3-7A0A075B6H7 116 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 F6UB75 175 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE2BQ13066 116 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE2EQ4V326 116 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 SLC25A29Q8N8R3 303 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 AJUBAQ96IF1 538 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 JPT2Q9H910 190 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE2DQ9UEU5 116 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 USP9YO00507 2555 aaPredicted RBP11.94□□□□□ -0.5
PABPC4-202ENST00000372857 TRAV21A0A0B4J279 112 aa11.94□□□□□ -0.5
PABPC4-202ENST00000372857 A4D1N5 150 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE12JA6NER3 117 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE7O76087 117 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE12FP0CL80 117 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE12GP0CL81 117 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE12IP0CL82 117 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
PABPC4-202ENST00000372857 GAGE4Q13068 117 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 PMVKQ15126 192 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 ZNRF2Q8NHG8 242 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 PIEZO1Q92508 2521 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 IGHV3-64A0A075B6Q5 118 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 CENPVL3A0A0U1RRI6 287 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
PABPC4-202ENST00000372857 IGIPA6NJ69 53 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 CCDC179H3BU77 68 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 EIF4EBP3O60516 100 aaPredicted RBP11.92□□□□□ -0.5
PABPC4-202ENST00000372857 CRLF1O75462 422 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 TTC32Q5I0X7 151 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 EEF1AKMT3Q96AZ1 226 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 TIMD4Q96H15 378 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 TRAV4A0A0B4J268 109 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 SNCGO76070 127 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 EBI3Q14213 229 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 FAM208BQ5VWN6 2430 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 J3QQQ9 107 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 RNASE3P12724 160 aaKnown RBP11.92□□□□□ -0.5
PABPC4-202ENST00000372857 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
PABPC4-202ENST00000372857 A0A087WWL8 130 aa11.91□□□□□ -0.5
PABPC4-202ENST00000372857 TRAV2A0A0B4J234 112 aa11.91□□□□□ -0.5
PABPC4-202ENST00000372857 M0QXV9 152 aa11.91□□□□□ -0.5
PABPC4-202ENST00000372857 ELANEP08246 267 aa11.91□□□□□ -0.5
PABPC4-202ENST00000372857 NDUFV3P56181 108 aaKnown RBP11.91□□□□□ -0.5
PABPC4-202ENST00000372857 NTN5Q8WTR8 489 aaPredicted RBP11.91□□□□□ -0.5
PABPC4-202ENST00000372857 LGALS3P17931 250 aaKnown RBP11.91□□□□□ -0.5
PABPC4-202ENST00000372857 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
PABPC4-202ENST00000372857 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
PABPC4-202ENST00000372857 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
PABPC4-202ENST00000372857 F5H697 171 aa11.9□□□□□ -0.5
PABPC4-202ENST00000372857 PAPPA-AS1Q5QFB9 102 aa11.9□□□□□ -0.5
PABPC4-202ENST00000372857 ITLN2Q8WWU7 325 aaPredicted RBP11.9□□□□□ -0.5
PABPC4-202ENST00000372857 AMELXQ99217 191 aa11.9□□□□□ -0.5
PABPC4-202ENST00000372857 RHODO00212 210 aa11.9□□□□□ -0.5
PABPC4-202ENST00000372857 Q1RN00 199 aa11.9□□□□□ -0.5
PABPC4-202ENST00000372857 IGHV4-39P01824 125 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 C9orf139Q6ZV77 190 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 U3KQE9 123 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 PPDPFQ9H3Y8 114 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 ACACBO00763 2458 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 SRD5A1P18405 259 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 UNQ9165/PRO28630Q6UXU0 137 aa11.89□□□□□ -0.51
PABPC4-202ENST00000372857 DOPEY2Q9Y3R5 2298 aa11.88□□□□□ -0.51
PABPC4-202ENST00000372857 LENEPQ9Y5L5 61 aa11.88□□□□□ -0.51
PABPC4-202ENST00000372857 USP9XQ93008 2570 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-202ENST00000372857 IGHV1-69DA0A0B4J2H0 117 aa11.88□□□□□ -0.51
PABPC4-202ENST00000372857 SUMO4Q6EEV6 95 aa11.88□□□□□ -0.51
PABPC4-202ENST00000372857 Q8N1Y9 231 aa11.88□□□□□ -0.51
PABPC4-202ENST00000372857 ZNF256Q9Y2P7 627 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-202ENST00000372857 CREBBPQ92793 2442 aa11.87□□□□□ -0.51
PABPC4-202ENST00000372857 TRBV7-1A0A0A6YYK4 115 aa11.87□□□□□ -0.51
PABPC4-202ENST00000372857 PPP1R17O96001 155 aa11.87□□□□□ -0.51
PABPC4-202ENST00000372857 IFITM1P13164 125 aa11.87□□□□□ -0.51
PABPC4-202ENST00000372857 LINC00315P59091 139 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms