RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 BUB3O43684 328 aa4.1□□□□□ -1.75
ATG4A-204ENST00000372246 IGFL2Q6UWQ7 119 aa4.1□□□□□ -1.75
ATG4A-204ENST00000372246 RNF152Q8N8N0 203 aa4.1□□□□□ -1.75
ATG4A-204ENST00000372246 PIFOQ8TCI5 191 aa4.1□□□□□ -1.75
ATG4A-204ENST00000372246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATG4A-204ENST00000372246 NIPBLQ6KC79 2804 aaeCLIP4.09□□□□□ -1.75
ATG4A-204ENST00000372246 IGLV4-69A0A075B6H9 119 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 IGHV7-81A0A0B4J1V7 117 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.09□□□□□ -1.75
ATG4A-204ENST00000372246 LINC01546A6NGU7 62 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 COX6B1P14854 86 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 PLNP26678 52 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 RNASE4P34096 147 aaKnown RBP4.09□□□□□ -1.75
ATG4A-204ENST00000372246 SUMO2P61956 95 aaKnown RBP4.09□□□□□ -1.75
ATG4A-204ENST00000372246 RPL11P62913 178 aaKnown RBP4.09□□□□□ -1.75
ATG4A-204ENST00000372246 PDE6HQ13956 83 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 FAM74A4Q5TZK3 123 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 ZNRF2Q8NHG8 242 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 CCDC140Q96MF4 163 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 CNFNQ9BYD5 112 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 TP53TG1Q9Y2A0 90 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 IGF2RP11717 2491 aa4.09□□□□□ -1.75
ATG4A-204ENST00000372246 MUC4Q99102 2169 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 TRAV2A0A0B4J234 112 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 A0A0J9YY99 117 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 CENPVL3A0A0U1RRI6 287 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 ATP6V0E1O15342 81 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 PRM2P04554 102 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 S100A4P26447 101 aaKnown RBP4.09□□□□□ -1.76
ATG4A-204ENST00000372246 UBE2D1P51668 147 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 TMEM30BQ3MIR4 351 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 TTC32Q5I0X7 151 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 UNQ9165/PRO28630Q6UXU0 137 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 NTN5Q8WTR8 489 aaPredicted RBP4.09□□□□□ -1.76
ATG4A-204ENST00000372246 DNAJC30Q96LL9 226 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 DPM3Q9P2X0 92 aa4.09□□□□□ -1.76
ATG4A-204ENST00000372246 ZNF256Q9Y2P7 627 aaPredicted RBP4.09□□□□□ -1.76
ATG4A-204ENST00000372246 SPG11Q96JI7 2443 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 ZANQ9Y493 2812 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 CREBBPQ92793 2442 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 IGHV3-11P01762 117 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 UBE2D3P61077 147 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 UBE2D2P62837 147 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 TCF15Q12870 199 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 CEMP1Q6PRD7 247 aaPredicted RBP4.08□□□□□ -1.76
ATG4A-204ENST00000372246 TEN1Q86WV5 123 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 C8orf31Q8N9H6 132 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 OR11H6Q8NGC7 330 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 KIR2DL5BQ8NHK3 375 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 TOMM6Q96B49 74 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 KAAG1Q9UBP8 84 aa4.08□□□□□ -1.76
ATG4A-204ENST00000372246 F5H697 171 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 PF4P02776 101 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 ZNF688P0C7X2 276 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 ZFP36P26651 326 aaKnown RBP4.07□□□□□ -1.76
ATG4A-204ENST00000372246 DAND5Q8N907 189 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 FAM57AQ8TBR7 257 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 C16orf92Q96LL3 132 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 Q9UF83 564 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 DOPEY2Q9Y3R5 2298 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 RBAKDNA6NC62 111 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 A8MWV9 139 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 SLC25A20O43772 301 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 IGHV3-30P01768 117 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 ZNF883P0CG24 379 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 IGHV3-30-5P0DP03 117 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 TAL2Q16559 108 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 C9orf47Q6ZRZ4 202 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 COX8CQ7Z4L0 72 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 VMO1Q7Z5L0 202 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 PPDPFLQ8WWR9 84 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 TMEM126AQ9H061 195 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 C2CD3Q4AC94 2353 aa4.07□□□□□ -1.76
ATG4A-204ENST00000372246 TRAV12-2A0A075B6T6 113 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 IGHV3-73A0A0B4J1V6 119 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 F5H768 121 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 Q1RN00 199 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 FAM159AQ6UWV7 190 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 ASCL5Q7RTU5 278 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 GPHB5Q86YW7 130 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 MUSTN1Q8IVN3 82 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 TEX29Q8N6K0 151 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 Q8N9W7 124 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 CLEC2BQ92478 149 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 DUX3Q96PT4 197 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 PHLDA3Q9Y5J5 127 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 NOTCH3Q9UM47 2321 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 NACAE9PAV3 2078 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 A0A0U1RRA0 63 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 RNASE3P12724 160 aaKnown RBP4.06□□□□□ -1.76
ATG4A-204ENST00000372246 SEC61GP60059 68 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 HIST2H2BDQ6DRA6 164 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 ZFAND6Q6FIF0 208 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 Q6ZS92 163 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 Q8N1Y9 231 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 ZFAND2AQ8N6M9 145 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 AMELXQ99217 191 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms