RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 CSNK1G2-AS1Q8NCQ2 148 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 LYNX1G3V0Z9 82 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 LYNX1P0DP58 116 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 RPL23P62829 140 aaKnown RBP2.79□□□□□ -1.96
MCF2-203ENST00000370576 ZC2HC1BQ5TFG8 222 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 MORN5Q5VZ52 161 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 C9orf47Q6ZRZ4 202 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 RFESDQ8TAC1 157 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 TMEM70Q9BUB7 260 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 COMMD5Q9GZQ3 224 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 C21orf62Q9NYP8 219 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 NDUFA4O00483 81 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 NTF3P20783 257 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 KRTAP10-9P60411 292 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 S100A10P60903 97 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 ZNF709Q8N972 641 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 RBMY1BA6NDE4 496 aaKnown RBP2.78□□□□□ -1.96
MCF2-203ENST00000370576 RBMY1EA6NEQ0 496 aaKnown RBP2.78□□□□□ -1.96
MCF2-203ENST00000370576 RBMY1DP0C7P1 496 aaKnown RBP2.78□□□□□ -1.96
MCF2-203ENST00000370576 RBMY1A1P0DJD3 496 aaKnown RBP2.78□□□□□ -1.96
MCF2-203ENST00000370576 RNASE4P34096 147 aaKnown RBP2.78□□□□□ -1.96
MCF2-203ENST00000370576 EDDM3BP56851 147 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 Q6ZRP5 223 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 C3orf56Q8N813 242 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 PARLQ9H300 379 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 LINC00527Q9UJ94 153 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 USF3Q68DE3 2245 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 ADGRG4Q8IZF6 3080 aa2.78□□□□□ -1.96
MCF2-203ENST00000370576 TMEM258P61165 79 aa2.78□□□□□ -1.97
MCF2-203ENST00000370576 ERHP84090 104 aaKnown RBP2.78□□□□□ -1.97
MCF2-203ENST00000370576 PRR4Q16378 134 aa2.78□□□□□ -1.97
MCF2-203ENST00000370576 CENPWQ5EE01 88 aa2.78□□□□□ -1.97
MCF2-203ENST00000370576 TEN1Q86WV5 123 aa2.78□□□□□ -1.97
MCF2-203ENST00000370576 UPK3BQ9BT76 320 aa2.78□□□□□ -1.97
MCF2-203ENST00000370576 ZNF586Q9NXT0 402 aa2.78□□□□□ -1.97
MCF2-203ENST00000370576 ZFYVE26Q68DK2 2539 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 CST7O76096 145 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 TRGC2P03986 189 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 IAPPP10997 89 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 OR10J1P30954 320 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 RRN3P1Q2M238 152 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 CASC10Q5T4H9 136 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 LCN15Q6UWW0 184 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 ATP5L2Q7Z4Y8 100 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 NTN5Q8WTR8 489 aaPredicted RBP2.77□□□□□ -1.97
MCF2-203ENST00000370576 ZNF331Q9NQX6 463 aaPredicted RBP2.77□□□□□ -1.97
MCF2-203ENST00000370576 SOX21Q9Y651 276 aaPredicted RBP2.77□□□□□ -1.97
MCF2-203ENST00000370576 CSMD2Q7Z408 3487 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 TEX15Q9BXT5 2789 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 POLEQ07864 2286 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 IGHV3OR16-13A0A075B7E8 117 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 UBE2L5PA0A1B0GUS4 154 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 H3BQ15 152 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 LCE2BO14633 110 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 LINC00310P59036 64 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 TVP23CQ96ET8 276 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 IMUPQ9GZP8 106 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 APCP25054 2843 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 FASNP49327 2511 aaKnown RBP2.77□□□□□ -1.97
MCF2-203ENST00000370576 IGHV1-58A0A0C4DH39 117 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 ZNF73O43830 326 aaPredicted RBP2.77□□□□□ -1.97
MCF2-203ENST00000370576 LGALS9BQ3B8N2 356 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 SPANXN5Q5MJ07 72 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 LGALS9CQ6DKI2 356 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 TMEM183AQ8IXX5 376 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 OR4B1Q8NGF8 309 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 LAMTOR3Q9UHA4 124 aa2.77□□□□□ -1.97
MCF2-203ENST00000370576 DOPEY1Q5JWR5 2465 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 TRRAPQ9Y4A5 3859 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 AHCTF1Q8WYP5 2266 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 LOC389332A0A1B0GUA5 103 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 TEX48A0A1B0GUV7 120 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 C7orf77A4D0Y5 90 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 SPINK8P0C7L1 97 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 ARL14EPLP0DKL9 152 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 HLA-DMBP28068 263 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 AKR1C2P52895 323 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 UNQ5815/PRO19632Q6UWF5 114 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 MIR17HGQ75NE6 70 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 AGPAT4-IT1Q9H0P7 198 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 E9PLD3 99 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 K7EP34 96 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 BMPR1BO00238 502 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 MP68P56378 58 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 MIC13Q5XKP0 118 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 CYB561D1Q8N8Q1 229 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 C4orf3Q8WVX3 66 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 SMCO4Q9NRQ5 59 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 SELENOKQ9Y6D0 94 aa2.76□□□□□ -1.97
MCF2-203ENST00000370576 C7orf71A4D174 169 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 TMEM262E9PQX1 116 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 LY6HO94772 140 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 COX6B1P14854 86 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 CRIP1P50238 77 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 ZNF90Q03938 601 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 C10orf55Q5SWW7 151 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 ATP6V0E2Q8NHE4 81 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 LINC01600Q96MT4 127 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms