RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
COL9A1-204ENST00000370496 A0A1W2PPQ1 181 aa10.3□□□□□ -0.76
COL9A1-204ENST00000370496 K7EQD1 137 aa10.3□□□□□ -0.76
COL9A1-204ENST00000370496 TMEM241Q24JQ0 296 aa10.3□□□□□ -0.76
COL9A1-204ENST00000370496 SLC25A29Q8N8R3 303 aa10.3□□□□□ -0.76
COL9A1-204ENST00000370496 LOC100131303A0A0U1RQF7 123 aa10.29□□□□□ -0.76
COL9A1-204ENST00000370496 F2Z2F3 143 aa10.29□□□□□ -0.76
COL9A1-204ENST00000370496 FAM3BP58499 235 aaPredicted RBP10.29□□□□□ -0.76
COL9A1-204ENST00000370496 CACNG7P62955 275 aa10.29□□□□□ -0.76
COL9A1-204ENST00000370496 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
COL9A1-204ENST00000370496 RYR2Q92736 4967 aa10.29□□□□□ -0.76
COL9A1-204ENST00000370496 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 CTRLP40313 264 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
COL9A1-204ENST00000370496 ZNF56Q15929 161 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 CT83Q5H943 113 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 UFSP1Q6NVU6 142 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 LYZL1Q6UWQ5 148 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 LINC00588Q9Y4M8 146 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 RYR3Q15413 4870 aa10.28□□□□□ -0.76
COL9A1-204ENST00000370496 A8MWL6 223 aa10.27□□□□□ -0.76
COL9A1-204ENST00000370496 ISOC2Q96AB3 205 aa10.27□□□□□ -0.76
COL9A1-204ENST00000370496 OSTCQ9NRP0 149 aa10.27□□□□□ -0.76
COL9A1-204ENST00000370496 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 CRYGDP07320 174 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 ESRGQ1W209 222 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
COL9A1-204ENST00000370496 MRPS16Q9Y3D3 137 aaKnown RBP10.26□□□□□ -0.77
COL9A1-204ENST00000370496 MGPP08493 103 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 TRGC1P0CF51 173 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 Q6ZSN1 163 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
COL9A1-204ENST00000370496 HYDINQ4G0P3 5121 aa10.25□□□□□ -0.77
COL9A1-204ENST00000370496 TWIST1Q15672 202 aa10.25□□□□□ -0.77
COL9A1-204ENST00000370496 VPS13DQ5THJ4 4388 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 KMT2AQ03164 3969 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 GAGE12JA6NER3 117 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 F5H697 171 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 NTF3P20783 257 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 RAB4BP61018 213 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 GAGE1Q13065 139 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 GAGE4Q13068 117 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 GAGE5Q13069 117 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 GAGE13Q4V321 117 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 OR10G8Q8NGN5 311 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 ZNRF2Q8NHG8 242 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 TSKUQ8WUA8 353 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 PGLYRP4Q96LB8 373 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
COL9A1-204ENST00000370496 UQCC3Q6UW78 93 aa10.23□□□□□ -0.77
COL9A1-204ENST00000370496 LYPD5Q6UWN5 251 aa10.23□□□□□ -0.77
COL9A1-204ENST00000370496 COMMD7Q86VX2 200 aa10.23□□□□□ -0.77
COL9A1-204ENST00000370496 GFRA4Q9GZZ7 299 aa10.23□□□□□ -0.77
COL9A1-204ENST00000370496 V9GYV3 84 aa10.23□□□□□ -0.77
COL9A1-204ENST00000370496 HIGD1CA8MV81 97 aa10.22□□□□□ -0.77
COL9A1-204ENST00000370496 M0R2N4 97 aa10.22□□□□□ -0.77
COL9A1-204ENST00000370496 WDR73Q6P4I2 378 aa10.22□□□□□ -0.77
COL9A1-204ENST00000370496 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
COL9A1-204ENST00000370496 TRBV10-1A0A0K0K1A3 114 aa10.21□□□□□ -0.78
COL9A1-204ENST00000370496 EVI2AP22794 236 aa10.21□□□□□ -0.78
COL9A1-204ENST00000370496 ATP6V0E2Q8NHE4 81 aa10.21□□□□□ -0.78
COL9A1-204ENST00000370496 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.78
COL9A1-204ENST00000370496 Q9H8V8 135 aa10.21□□□□□ -0.78
COL9A1-204ENST00000370496 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.78
COL9A1-204ENST00000370496 FAM231BA6NCW3 169 aa10.2□□□□□ -0.78
COL9A1-204ENST00000370496 LINC00694P0DN24 101 aa10.2□□□□□ -0.78
COL9A1-204ENST00000370496 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
COL9A1-204ENST00000370496 PNRC1Q12796 327 aaPredicted RBP10.2□□□□□ -0.78
COL9A1-204ENST00000370496 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
COL9A1-204ENST00000370496 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
COL9A1-204ENST00000370496 A0A1B0GUT8 65 aa10.19□□□□□ -0.78
COL9A1-204ENST00000370496 H7C1H1 209 aa10.19□□□□□ -0.78
COL9A1-204ENST00000370496 SIVA1O15304 175 aa10.19□□□□□ -0.78
COL9A1-204ENST00000370496 TTC32Q5I0X7 151 aa10.19□□□□□ -0.78
COL9A1-204ENST00000370496 GTSF1LQ9H1H1 148 aa10.19□□□□□ -0.78
COL9A1-204ENST00000370496 Q9UF83 564 aa10.19□□□□□ -0.78
COL9A1-204ENST00000370496 NAT8BQ9UHF3 227 aa10.19□□□□□ -0.78
COL9A1-204ENST00000370496 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
COL9A1-204ENST00000370496 LCE2BO14633 110 aa10.18□□□□□ -0.78
COL9A1-204ENST00000370496 FOXA3P55318 350 aaPredicted RBP10.18□□□□□ -0.78
COL9A1-204ENST00000370496 TIRAPP58753 221 aa10.18□□□□□ -0.78
COL9A1-204ENST00000370496 OR10J3Q5JRS4 329 aa10.18□□□□□ -0.78
COL9A1-204ENST00000370496 SUMO4Q6EEV6 95 aa10.18□□□□□ -0.78
COL9A1-204ENST00000370496 TRBV7-3A0A075B6L6 115 aa10.17□□□□□ -0.78
COL9A1-204ENST00000370496 TRAV8-6A0A0B4J262 113 aa10.17□□□□□ -0.78
COL9A1-204ENST00000370496 F8W036 122 aa10.17□□□□□ -0.78
COL9A1-204ENST00000370496 LINC00315P59091 139 aa10.17□□□□□ -0.78
COL9A1-204ENST00000370496 WFDC10BQ8IUB3 73 aa10.17□□□□□ -0.78
COL9A1-204ENST00000370496 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.17□□□□□ -0.78
COL9A1-204ENST00000370496 NEXN-AS1Q8NBZ9 246 aa10.17□□□□□ -0.78
COL9A1-204ENST00000370496 NUP35Q8NFH5 326 aa10.17□□□□□ -0.78
COL9A1-204ENST00000370496 PPP1R2P9O14990 202 aa10.16□□□□□ -0.78
COL9A1-204ENST00000370496 LELP1Q5T871 98 aa10.16□□□□□ -0.78
COL9A1-204ENST00000370496 Q6ZR54 194 aa10.16□□□□□ -0.78
COL9A1-204ENST00000370496 SMIM27A0A1W2PRY6 76 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms