RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 DAZ4Q86SG3 579 aaKnown RBP6.6□□□□□ -1.35
ABCA4-201ENST00000370225 DAZ3Q9NR90 486 aaKnown RBP6.6□□□□□ -1.35
ABCA4-201ENST00000370225 MRPL36Q9P0J6 103 aaKnown RBP6.6□□□□□ -1.35
ABCA4-201ENST00000370225 IGLL1P15814 213 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 IGLC2P0DOY2 106 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 IGLC3P0DOY3 106 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 MYCNOSP40205 109 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 RPL39P62891 51 aaKnown RBP6.6□□□□□ -1.35
ABCA4-201ENST00000370225 ZNF493Q6ZR52 646 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 UNQ9165/PRO28630Q6UXU0 137 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 VSIG2Q96IQ7 327 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 C11orf45Q8TAV5 145 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 GTSF1Q8WW33 167 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 H3BMG7 143 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 COX8AP10176 69 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 TNRC6BQ9UPQ9 1833 aaKnown RBP6.59□□□□□ -1.35
ABCA4-201ENST00000370225 ORMDL1Q9P0S3 153 aa6.59□□□□□ -1.35
ABCA4-201ENST00000370225 UTF1Q5T230 341 aa6.59□□□□□ -1.36
ABCA4-201ENST00000370225 TM2D2Q9BX73 214 aa6.59□□□□□ -1.36
ABCA4-201ENST00000370225 RNF183Q96D59 192 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 E7EUB6 86 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 TRBV7-3A0A075B6L6 115 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 HIGD2BQ4VC39 106 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 ZFP2Q6ZN57 461 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 ARHGAP21Q5T5U3 1957 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 MUC6Q6W4X9 2439 aa6.58□□□□□ -1.36
ABCA4-201ENST00000370225 B5MCH6 92 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 PCP2Q8IVA1 136 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 IGKV1-17P01599 117 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 MDFICQ9P1T7 246 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 IGHV4-31P0DP07 118 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 ZNF843Q8N446 348 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 RNF152Q8N8N0 203 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 Q8NFD4 153 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 A0A0J9YXV3 536 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 CRYBA4P53673 196 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 ETDBQ3ZM63 59 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 SH2D6Q7Z4S9 175 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 TMEM61Q8N0U2 210 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 SIRPDQ9H106 197 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 LINC01548A6NM66 108 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 NDUFA1O15239 70 aa6.57□□□□□ -1.36
ABCA4-201ENST00000370225 TNRC6AQ8NDV7 1962 aaKnown RBP6.56□□□□□ -1.36
ABCA4-201ENST00000370225 C11orf52Q96A22 123 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 TRAV26-1A0A087WT03 109 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 PATE2Q6UY27 113 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 HERV-K104P63124 156 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 KIAA1549LQ6ZVL6 1849 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 FUSP35637 526 aaKnown RBP eCLIP6.56□□□□□ -1.36
ABCA4-201ENST00000370225 P0DMU3 169 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 FAM231AP0DMU4 169 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 FAM231CP0DMU5 169 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 MSMPQ1L6U9 139 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 KRTAP27-1Q3LI81 207 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 MAP6D1Q9H9H5 199 aa6.56□□□□□ -1.36
ABCA4-201ENST00000370225 OBSL1O75147 1896 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 A0A1W2PPM0 123 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 LINC00482Q8N8I6 264 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 IGHG2P01859 326 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 RBM3P98179 157 aaKnown RBP6.55□□□□□ -1.36
ABCA4-201ENST00000370225 PPDPFLQ8WWR9 84 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 TP53TG3Q9ULZ0 132 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 FAM208BQ5VWN6 2430 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 WI2-2373I1.2A0A1W2PRP0 233 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 TMEM258P61165 79 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 MUSTN1Q8IVN3 82 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 A6NDX4 124 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 SPAG11BQ08648 103 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 LYPD6BQ8NI32 183 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 LENEPQ9Y5L5 61 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 TNCP24821 2201 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 TANC2Q9HCD6 1990 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 PTPRQQ9UMZ3 2332 aa6.55□□□□□ -1.36
ABCA4-201ENST00000370225 NDUFA11Q86Y39 141 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 ODF3L1Q8IXM7 274 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 GAGE12HA6NDE8 117 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
ABCA4-201ENST00000370225 GPHB5Q86YW7 130 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 M0R2N4 97 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 CCL25O15444 150 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 NTN5Q8WTR8 489 aaPredicted RBP6.54□□□□□ -1.36
ABCA4-201ENST00000370225 LY6G6DO95868 133 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 CFC1BP0CG36 223 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 CFC1P0CG37 223 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 TECTAO75443 2155 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 A0A096LNI7 61 aa6.54□□□□□ -1.36
ABCA4-201ENST00000370225 OPRPNQ99935 248 aaPredicted RBP6.54□□□□□ -1.36
ABCA4-201ENST00000370225 NCOA6Q14686 2063 aaPredicted RBP6.54□□□□□ -1.36
ABCA4-201ENST00000370225 ZNF747Q9BV97 191 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms