RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 CARD19Q96LW7 228 aa7.96□□□□□ -1.14
PRPF38B-201ENST00000370021 COL12A1Q99715 3063 aa7.96□□□□□ -1.14
PRPF38B-201ENST00000370021 IGHV7-81A0A0B4J1V7 117 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 TRBV6-1A0A0K0K1D8 114 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 KLK9Q9UKQ9 250 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 CFC1BP0CG36 223 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 CFC1P0CG37 223 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 KLRB1Q12918 225 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 Q6ZS92 163 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 ZMAT4Q9H898 229 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 KAAG1Q9UBP8 84 aa7.95□□□□□ -1.14
PRPF38B-201ENST00000370021 IGKV3OR2-268A0A0C4DH90 116 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 IGHG4P01861 327 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 FHL3Q13643 280 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 RNF5Q99942 180 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 FOXC1Q12948 553 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 CEMP1Q6PRD7 247 aaPredicted RBP7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 NEXN-AS1Q8NBZ9 246 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 CLEC2BQ92478 149 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 DUX5Q96PT3 197 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 PRO0461Q9UI25 63 aa7.94□□□□□ -1.14
PRPF38B-201ENST00000370021 IGHV3OR16-12A0A075B7B8 117 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 OVOL3O00110 214 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 CRLF1O75462 422 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 TRBV12-3P01733 135 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 SAA4P35542 130 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 KHDC1LQ5JSQ8 128 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 SVEP1Q4LDE5 3571 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 A0A0J9YY99 117 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 VCYO14598 125 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 CD28P10747 220 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 Q6ZSV7 163 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 Q8N1Y9 231 aa7.93□□□□□ -1.14
PRPF38B-201ENST00000370021 CCDC168Q8NDH2 2452 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 IGHV7-4-1A0A0J9YVY3 117 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 A8MZ25 164 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 UNQ9165/PRO28630Q6UXU0 137 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 C8orf31Q8N9H6 132 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 CENPEQ02224 2701 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 F8W735 103 aaPredicted RBP7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 M0R2P5 195 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 CHCHD5Q9BSY4 110 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 ZNF580Q9UK33 172 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 POLQO75417 2590 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 H3BMM0 161 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 PAPPA-AS1Q5QFB9 102 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 UBE2WQ96B02 151 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 RELNP78509 3460 aa7.92□□□□□ -1.14
PRPF38B-201ENST00000370021 AKAP13Q12802 2813 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 IGHV3-38A0A0C4DH36 116 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 NDUFV3P56181 108 aaKnown RBP7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 AJUBAQ96IF1 538 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 C20orf173Q96LM9 149 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 MSRB2Q9Y3D2 182 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 FN1P02751 2386 aaKnown RBP7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 IGLV2-18A0A075B6J9 118 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 TSPEAR-AS2P59090 65 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 RHPN1-AS1Q9BWJ2 59 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 SPINK13Q1W4C9 94 aa7.91□□□□□ -1.14
PRPF38B-201ENST00000370021 SPTBN4Q9H254 2564 aa7.9□□□□□ -1.14
PRPF38B-201ENST00000370021 LINC01620Q4KN68 170 aa7.9□□□□□ -1.14
PRPF38B-201ENST00000370021 TRAV12-1A0A0B4J245 112 aa7.9□□□□□ -1.14
PRPF38B-201ENST00000370021 TRAV41A0A0B4J266 112 aa7.9□□□□□ -1.14
PRPF38B-201ENST00000370021 MRPL23Q16540 153 aaKnown RBP7.9□□□□□ -1.14
PRPF38B-201ENST00000370021 SUMO4Q6EEV6 95 aa7.9□□□□□ -1.14
PRPF38B-201ENST00000370021 IGFL2Q6UWQ7 119 aa7.9□□□□□ -1.15
PRPF38B-201ENST00000370021 PRRC2AP48634 2157 aaKnown RBP7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 PPP1R17O96001 155 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 Q8N9W7 124 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 CCDC140Q96MF4 163 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 TIMM21Q9BVV7 248 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 C9orf139Q6ZV77 190 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 JMJD1CQ15652 2540 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 IGHV3-16A0A0C4DH30 117 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 ZFP36P26651 326 aaKnown RBP7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 SHISA2Q6UWI4 295 aa7.89□□□□□ -1.15
PRPF38B-201ENST00000370021 SYNJ2BPP57105 145 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 ZNRF2Q8NHG8 242 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 PIFOQ8TCI5 191 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 ZNF292O60281 2723 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 RNASE1P07998 156 aaKnown RBP7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 PLA2G2CQ5R387 149 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 FAM110DQ8TAY7 271 aaPredicted RBP7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 TNFRSF18Q9Y5U5 241 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 TRBV7-9A0A0J9YWB2 115 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 CLPSL1A2RUU4 121 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 P0DMU3 169 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 FAM231AP0DMU4 169 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 FAM231CP0DMU5 169 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 NPBQ8NG41 125 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 MDFICQ9P1T7 246 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 HIVEP3Q5T1R4 2406 aa7.88□□□□□ -1.15
PRPF38B-201ENST00000370021 OVOL1O14753 267 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 IGHV3-30P01768 117 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 PRM2P04554 102 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 IGHV3-30-5P0DP03 117 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms