RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PF4V1P10720 104 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 TMEM219Q86XT9 240 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 DPH3P1Q9H4G8 78 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 IGHV4-4A0A075B6R2 117 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 A0A087WWL8 130 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 C9JAW5 83 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 SRD5A1P18405 259 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 UBE2D3P61077 147 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 UBE2D2P62837 147 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 CDSNQ15517 529 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 TRPT1Q86TN4 253 aaKnown RBP9.3□□□□□ -0.92
PHGDH-201ENST00000369407 FAM110DQ8TAY7 271 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-201ENST00000369407 TRBV12-3P01733 135 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 TIMD4Q96H15 378 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 OPRPNQ99935 248 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-201ENST00000369407 VPREB3Q9UKI3 123 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 IGLV4-69A0A075B6H9 119 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 IGHV3OR16-10A0A075B7F0 116 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 LOC107984640A0A0U1RRK4 108 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 ASIPP42127 132 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 UNQ9165/PRO28630Q6UXU0 137 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 ZFAND2AQ8N6M9 145 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 UBTD1Q9HAC8 227 aa9.29□□□□□ -0.92
PHGDH-201ENST00000369407 LINC01619G3V211 115 aa9.28□□□□□ -0.92
PHGDH-201ENST00000369407 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
PHGDH-201ENST00000369407 F5H697 171 aa9.28□□□□□ -0.92
PHGDH-201ENST00000369407 GPHB5Q86YW7 130 aa9.28□□□□□ -0.92
PHGDH-201ENST00000369407 ATP6V0E2Q8NHE4 81 aa9.28□□□□□ -0.92
PHGDH-201ENST00000369407 M0R1W7 72 aa9.27□□□□□ -0.93
PHGDH-201ENST00000369407 MUC4Q99102 2169 aa9.27□□□□□ -0.93
PHGDH-201ENST00000369407 ZNRF2Q8NHG8 242 aa9.27□□□□□ -0.93
PHGDH-201ENST00000369407 EEF1AKMT3Q96AZ1 226 aa9.27□□□□□ -0.93
PHGDH-201ENST00000369407 SPG11Q96JI7 2443 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 IGHV3-30P01768 117 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 IGHV3-30-5P0DP03 117 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 C15orf53Q8NAA6 179 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-201ENST00000369407 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 IGHV4-39P01824 125 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 Q1RN00 199 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 ZNF256Q9Y2P7 627 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-201ENST00000369407 TRAV21A0A0B4J279 112 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 RHODO00212 210 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 RNASE3P12724 160 aaKnown RBP9.26□□□□□ -0.93
PHGDH-201ENST00000369407 OR10J6PQ8NGY7 276 aa9.26□□□□□ -0.93
PHGDH-201ENST00000369407 ELANEP08246 267 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 SAA4P35542 130 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 CUBNO60494 3623 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 TRAV2A0A0B4J234 112 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 A4D1N5 150 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-201ENST00000369407 EBI3Q14213 229 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 ZNF580Q9UK33 172 aa9.25□□□□□ -0.93
PHGDH-201ENST00000369407 TMEM262E9PQX1 116 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 CCL21O00585 134 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 HERVK_113P61574 105 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 ITLN2Q8WWU7 325 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-201ENST00000369407 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 SLC25A20O43772 301 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 PMVKQ15126 192 aa9.24□□□□□ -0.93
PHGDH-201ENST00000369407 EDN2P20800 178 aa9.23□□□□□ -0.93
PHGDH-201ENST00000369407 SUMO4Q6EEV6 95 aa9.23□□□□□ -0.93
PHGDH-201ENST00000369407 SORL1Q92673 2214 aa9.23□□□□□ -0.93
PHGDH-201ENST00000369407 J3QQQ9 107 aa9.23□□□□□ -0.93
PHGDH-201ENST00000369407 SLC25A29Q8N8R3 303 aa9.23□□□□□ -0.93
PHGDH-201ENST00000369407 KLK5Q9Y337 293 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-201ENST00000369407 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 LGALS3P17931 250 aaKnown RBP9.22□□□□□ -0.93
PHGDH-201ENST00000369407 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
PHGDH-201ENST00000369407 U3KQE9 123 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 DOPEY2Q9Y3R5 2298 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 TEX49A0A1B0GTD5 131 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 C9orf139Q6ZV77 190 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 SDHAF1A6NFY7 115 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 LINC00694P0DN24 101 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 LINC00315P59091 139 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 ZNF56Q15929 161 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 MINOS1Q5TGZ0 78 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 LYRM7Q5U5X0 104 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 MINOS1-NBL1R4GNA1 71 aa9.22□□□□□ -0.93
PHGDH-201ENST00000369407 TRBV7-1A0A0A6YYK4 115 aa9.21□□□□□ -0.93
PHGDH-201ENST00000369407 FOXC1Q12948 553 aa9.21□□□□□ -0.93
PHGDH-201ENST00000369407 IGF2-ASQ6U949 168 aa9.21□□□□□ -0.93
PHGDH-201ENST00000369407 AMELXQ99217 191 aa9.21□□□□□ -0.93
PHGDH-201ENST00000369407 SIRPDQ9H106 197 aa9.21□□□□□ -0.93
PHGDH-201ENST00000369407 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.93
PHGDH-201ENST00000369407 MUSTN1Q8IVN3 82 aa9.21□□□□□ -0.94
PHGDH-201ENST00000369407 TRAV12-3A0A0B4J271 114 aa9.2□□□□□ -0.94
PHGDH-201ENST00000369407 CENPVL3A0A0U1RRI6 287 aa9.2□□□□□ -0.94
PHGDH-201ENST00000369407 TCF15Q12870 199 aa9.2□□□□□ -0.94
PHGDH-201ENST00000369407 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
PHGDH-201ENST00000369407 NPC2P61916 151 aa9.2□□□□□ -0.94
PHGDH-201ENST00000369407 OOSP1A8MZH6 123 aa9.2□□□□□ -0.94
PHGDH-201ENST00000369407 KIF25-AS1Q9Y6Z4 181 aa9.2□□□□□ -0.94
PHGDH-201ENST00000369407 TRAV41A0A0B4J266 112 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms