RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 A0A0G2JNJ9 132 aa13.48□□□□□ -0.25
CHTOP-201ENST00000368686 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
CHTOP-201ENST00000368686 HERVK_113P63121 156 aa13.48□□□□□ -0.25
CHTOP-201ENST00000368686 LPAL2Q16609 132 aa13.48□□□□□ -0.25
CHTOP-201ENST00000368686 Q9UFV3 132 aa13.48□□□□□ -0.25
CHTOP-201ENST00000368686 OOSP1A8MZH6 123 aa13.47□□□□□ -0.25
CHTOP-201ENST00000368686 ZFAND2AQ8N6M9 145 aa13.47□□□□□ -0.25
CHTOP-201ENST00000368686 LINC00477Q96M19 166 aa13.47□□□□□ -0.25
CHTOP-201ENST00000368686 ZNF22P17026 224 aaPredicted RBP13.47□□□□□ -0.25
CHTOP-201ENST00000368686 ZNF256Q9Y2P7 627 aaPredicted RBP13.47□□□□□ -0.25
CHTOP-201ENST00000368686 NXPH4O95158 308 aa13.46□□□□□ -0.25
CHTOP-201ENST00000368686 KIF25-AS1Q9Y6Z4 181 aa13.46□□□□□ -0.25
CHTOP-201ENST00000368686 ZZEF1O43149 2961 aa13.46□□□□□ -0.26
CHTOP-201ENST00000368686 IGHV3OR16-13A0A075B7E8 117 aa13.46□□□□□ -0.26
CHTOP-201ENST00000368686 IGHV3-74A0A0B4J1X5 117 aa13.46□□□□□ -0.26
CHTOP-201ENST00000368686 LINC00315P59091 139 aa13.46□□□□□ -0.26
CHTOP-201ENST00000368686 C15orf32Q32M92 178 aa13.46□□□□□ -0.26
CHTOP-201ENST00000368686 C16orf92Q96LL3 132 aa13.46□□□□□ -0.26
CHTOP-201ENST00000368686 LOC107984640A0A0U1RRK4 108 aa13.45□□□□□ -0.26
CHTOP-201ENST00000368686 IGF1P05019 195 aa13.45□□□□□ -0.26
CHTOP-201ENST00000368686 C9orf139Q6ZV77 190 aa13.45□□□□□ -0.26
CHTOP-201ENST00000368686 CEMP1Q6PRD7 247 aaPredicted RBP13.44□□□□□ -0.26
CHTOP-201ENST00000368686 LINC00643Q86TS7 51 aa13.44□□□□□ -0.26
CHTOP-201ENST00000368686 CLEC2BQ92478 149 aa13.44□□□□□ -0.26
CHTOP-201ENST00000368686 TRBV27A0A0K0K1C4 114 aa13.44□□□□□ -0.26
CHTOP-201ENST00000368686 RNASE3P12724 160 aaKnown RBP13.44□□□□□ -0.26
CHTOP-201ENST00000368686 IGHV3-64A0A075B6Q5 118 aa13.43□□□□□ -0.26
CHTOP-201ENST00000368686 SUMO4Q6EEV6 95 aa13.43□□□□□ -0.26
CHTOP-201ENST00000368686 LITAFQ99732 161 aa13.43□□□□□ -0.26
CHTOP-201ENST00000368686 FAM19A5Q7Z5A7 132 aaPredicted RBP13.43□□□□□ -0.26
CHTOP-201ENST00000368686 ITLN2Q8WWU7 325 aaPredicted RBP13.43□□□□□ -0.26
CHTOP-201ENST00000368686 ARRDC1-AS1Q9H2J1 176 aa13.43□□□□□ -0.26
CHTOP-201ENST00000368686 RPS28P62857 69 aaKnown RBP13.42□□□□□ -0.26
CHTOP-201ENST00000368686 LINC00527Q9UJ94 153 aa13.42□□□□□ -0.26
CHTOP-201ENST00000368686 IGHV3-49A0A0A0MS15 119 aa13.42□□□□□ -0.26
CHTOP-201ENST00000368686 FAM110DQ8TAY7 271 aaPredicted RBP13.42□□□□□ -0.26
CHTOP-201ENST00000368686 DEFB104AQ8WTQ1 72 aa13.42□□□□□ -0.26
CHTOP-201ENST00000368686 U3KQE9 123 aa13.42□□□□□ -0.26
CHTOP-201ENST00000368686 TRBV6-5A0A0K0K1A5 114 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 WIPF1O43516 503 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 PRSS2P07478 247 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 RHOHQ15669 191 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 NSUN5P1Q3KNT7 163 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 IGHV7-81A0A0B4J1V7 117 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 I3L3M4 83 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 GNRH2O43555 120 aa13.41□□□□□ -0.26
CHTOP-201ENST00000368686 ARHGAP32A7KAX9 2087 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 OVOL1O14753 267 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 CXCL5P42830 114 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 KLK9Q2XQG4 91 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 TMEM219Q86XT9 240 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 Q8N6K4 173 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 LY6G5BQ8NDX9 201 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 OR13C6PQ8NH95 151 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 C20orf173Q96LM9 149 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 KLK9Q9UKQ9 250 aa13.4□□□□□ -0.26
CHTOP-201ENST00000368686 COX7CP15954 63 aa13.39□□□□□ -0.27
CHTOP-201ENST00000368686 ODF3BA8MYP8 253 aa13.39□□□□□ -0.27
CHTOP-201ENST00000368686 IGHV3-30-3P0DP02 117 aa13.39□□□□□ -0.27
CHTOP-201ENST00000368686 MIAQ16674 131 aa13.39□□□□□ -0.27
CHTOP-201ENST00000368686 CLEC19AQ6UXS0 136 aa13.39□□□□□ -0.27
CHTOP-201ENST00000368686 CCDC140Q96MF4 163 aa13.39□□□□□ -0.27
CHTOP-201ENST00000368686 TRAV8-3A0A0A6YYJ7 113 aa13.38□□□□□ -0.27
CHTOP-201ENST00000368686 RNASE4P34096 147 aaKnown RBP13.38□□□□□ -0.27
CHTOP-201ENST00000368686 OPRPNQ99935 248 aaPredicted RBP13.38□□□□□ -0.27
CHTOP-201ENST00000368686 F5H697 171 aa13.38□□□□□ -0.27
CHTOP-201ENST00000368686 APRG1Q8IVJ8 170 aa13.38□□□□□ -0.27
CHTOP-201ENST00000368686 SMCR5Q8TEV8 140 aa13.38□□□□□ -0.27
CHTOP-201ENST00000368686 TIMM21Q9BVV7 248 aa13.38□□□□□ -0.27
CHTOP-201ENST00000368686 A0A0J9YXV3 536 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 CRYGAP11844 174 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 TMEM61Q8N0U2 210 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 DCANP1Q8TF63 244 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 GAGE2AQ6NT46 116 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 SDIM1Q6ZPB5 146 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 VMO1Q7Z5L0 202 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 FAM19A4Q96LR4 140 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 ZNF580Q9UK33 172 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
CHTOP-201ENST00000368686 ROS1P08922 2347 aa13.37□□□□□ -0.27
CHTOP-201ENST00000368686 MUC4Q99102 2169 aa13.36□□□□□ -0.27
CHTOP-201ENST00000368686 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
CHTOP-201ENST00000368686 EEF1AKMT3Q96AZ1 226 aa13.36□□□□□ -0.27
CHTOP-201ENST00000368686 DCHS1Q96JQ0 3298 aa13.36□□□□□ -0.27
CHTOP-201ENST00000368686 ADAMTSL4-AS1Q5T5F5 129 aa13.36□□□□□ -0.27
CHTOP-201ENST00000368686 UBTD1Q9HAC8 227 aa13.36□□□□□ -0.27
CHTOP-201ENST00000368686 KALRNO60229 2985 aa13.35□□□□□ -0.27
CHTOP-201ENST00000368686 ADARB2-AS1A8MUL3 147 aa13.35□□□□□ -0.27
CHTOP-201ENST00000368686 E7EQL1 145 aa13.35□□□□□ -0.27
CHTOP-201ENST00000368686 LYNX1G3V0Z9 82 aa13.35□□□□□ -0.27
CHTOP-201ENST00000368686 LYNX1P0DP58 116 aa13.35□□□□□ -0.27
CHTOP-201ENST00000368686 ECSCRQ19T08 205 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 PKDREJQ9NTG1 2253 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 A0A087WWL8 130 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 TRBV7-1A0A0A6YYK4 115 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 TRAV25A0A0B4J276 109 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 Q6ZSV7 163 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 C20orf203Q8NBC4 194 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 JPT2Q9H910 190 aa13.34□□□□□ -0.27
CHTOP-201ENST00000368686 WDFY4Q6ZS81 3184 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms