RNA–Protein interactions for RNA: ENST00000368450.5

SHC1-204, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-204ENST00000368450 CLPSL1A2RUU4 121 aa11.34□□□□□ -0.59
SHC1-204ENST00000368450 ANKHD1Q8IWZ3 2542 aaKnown RBP11.34□□□□□ -0.59
SHC1-204ENST00000368450 TMEM263Q8WUH6 116 aaKnown RBP11.34□□□□□ -0.59
SHC1-204ENST00000368450 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
SHC1-204ENST00000368450 IGIPA6NJ69 53 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.6
SHC1-204ENST00000368450 CD3EP07766 207 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 GPHB5Q86YW7 130 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.33□□□□□ -0.6
SHC1-204ENST00000368450 SDHAF1A6NFY7 115 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 B9A039 149 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 PPP1R17O96001 155 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 VMO1Q7Z5L0 202 aa11.33□□□□□ -0.6
SHC1-204ENST00000368450 LINC01560Q8TB33 94 aa11.32□□□□□ -0.6
SHC1-204ENST00000368450 RIF1Q5UIP0 2472 aaKnown RBP11.32□□□□□ -0.6
SHC1-204ENST00000368450 ZNF580Q9UK33 172 aa11.32□□□□□ -0.6
SHC1-204ENST00000368450 SORL1Q92673 2214 aa11.32□□□□□ -0.6
SHC1-204ENST00000368450 VCYO14598 125 aa11.32□□□□□ -0.6
SHC1-204ENST00000368450 TRIAP1O43715 76 aa11.32□□□□□ -0.6
SHC1-204ENST00000368450 CCDC140Q96MF4 163 aa11.32□□□□□ -0.6
SHC1-204ENST00000368450 SPXQ9BT56 116 aa11.32□□□□□ -0.6
SHC1-204ENST00000368450 TRBV10-2A0A0K0K1G8 114 aa11.31□□□□□ -0.6
SHC1-204ENST00000368450 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
SHC1-204ENST00000368450 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
SHC1-204ENST00000368450 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 SUMO4Q6EEV6 95 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 CLEC2BQ92478 149 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 EEF1AKMT3Q96AZ1 226 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 MUC4Q99102 2169 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 Q6ZSV7 163 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 TMEM141Q96I45 108 aa11.3□□□□□ -0.6
SHC1-204ENST00000368450 A0A0J9YXV3 536 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 LGALS9O00182 355 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 COX6CP09669 75 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 Q8N9W7 124 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 ASH1LQ9NR48 2969 aaKnown RBP11.29□□□□□ -0.6
SHC1-204ENST00000368450 P0DMU3 169 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 FAM231AP0DMU4 169 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 FAM231CP0DMU5 169 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 RNASE3P12724 160 aaKnown RBP11.29□□□□□ -0.6
SHC1-204ENST00000368450 FAM110DQ8TAY7 271 aaPredicted RBP11.29□□□□□ -0.6
SHC1-204ENST00000368450 AMELXQ99217 191 aa11.29□□□□□ -0.6
SHC1-204ENST00000368450 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
SHC1-204ENST00000368450 UBE2E1P51965 193 aa11.28□□□□□ -0.6
SHC1-204ENST00000368450 ANKRD11Q6UB99 2663 aaPredicted RBP11.28□□□□□ -0.6
SHC1-204ENST00000368450 TRAV8-3A0A0A6YYJ7 113 aa11.28□□□□□ -0.6
SHC1-204ENST00000368450 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
SHC1-204ENST00000368450 M0R2P5 195 aa11.28□□□□□ -0.6
SHC1-204ENST00000368450 DCHS2Q6V1P9 2916 aa11.28□□□□□ -0.6
SHC1-204ENST00000368450 C9orf139Q6ZV77 190 aa11.28□□□□□ -0.6
SHC1-204ENST00000368450 LEPROTO15243 131 aa11.27□□□□□ -0.6
SHC1-204ENST00000368450 Q6Q795 121 aa11.27□□□□□ -0.6
SHC1-204ENST00000368450 PLA2G2CQ5R387 149 aa11.27□□□□□ -0.61
SHC1-204ENST00000368450 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.61
SHC1-204ENST00000368450 SPTAN1Q13813 2472 aaKnown RBP11.27□□□□□ -0.61
SHC1-204ENST00000368450 RELNP78509 3460 aa11.27□□□□□ -0.61
SHC1-204ENST00000368450 TIMM17AQ99595 171 aa11.27□□□□□ -0.61
SHC1-204ENST00000368450 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
SHC1-204ENST00000368450 H7C423 109 aa11.26□□□□□ -0.61
SHC1-204ENST00000368450 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
SHC1-204ENST00000368450 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
SHC1-204ENST00000368450 PPDPFQ9H3Y8 114 aa11.26□□□□□ -0.61
SHC1-204ENST00000368450 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
SHC1-204ENST00000368450 RNASE13Q5GAN3 156 aaKnown RBP11.25□□□□□ -0.61
SHC1-204ENST00000368450 LY6G5BQ8NDX9 201 aa11.25□□□□□ -0.61
SHC1-204ENST00000368450 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
SHC1-204ENST00000368450 A0A0J9YXY3 114 aa11.25□□□□□ -0.61
SHC1-204ENST00000368450 FAM236AA0A1B0GUQ0 79 aa11.25□□□□□ -0.61
SHC1-204ENST00000368450 FAM236BA0A1B0GV22 79 aa11.25□□□□□ -0.61
SHC1-204ENST00000368450 ZNF22P17026 224 aaPredicted RBP11.25□□□□□ -0.61
SHC1-204ENST00000368450 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
SHC1-204ENST00000368450 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 BRI3O95415 125 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 PIP4P1Q86T03 277 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 ODF3BA8MYP8 253 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 OVOL1O14753 267 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 UNQ9165/PRO28630Q6UXU0 137 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 IGHV3-11P01762 117 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 LENEPQ9Y5L5 61 aa11.24□□□□□ -0.61
SHC1-204ENST00000368450 TMEM95Q3KNT9 176 aa11.23□□□□□ -0.61
SHC1-204ENST00000368450 TMEM219Q86XT9 240 aa11.23□□□□□ -0.61
SHC1-204ENST00000368450 BDP1A6H8Y1 2624 aa11.23□□□□□ -0.61
SHC1-204ENST00000368450 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
SHC1-204ENST00000368450 IGFL3Q6UXB1 125 aa11.23□□□□□ -0.61
SHC1-204ENST00000368450 LINC00315P59091 139 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 Q8N6K4 173 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 A8MZ25 164 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 M0QXV9 152 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 TRBV12-3P01733 135 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 ID1P41134 155 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 DAND5Q8N907 189 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
SHC1-204ENST00000368450 M0R1W7 72 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms