RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 TRAV8-2A0A0B4J237 113 aa8.21□□□□□ -1.09
PTPRK-205ENST00000368213 A8MWP6 167 aa8.21□□□□□ -1.09
PTPRK-205ENST00000368213 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.09
PTPRK-205ENST00000368213 PRAC2D3DTV9 90 aa8.21□□□□□ -1.09
PTPRK-205ENST00000368213 ZNF479Q96JC4 524 aa8.21□□□□□ -1.09
PTPRK-205ENST00000368213 FREM1Q5H8C1 2179 aa8.21□□□□□ -1.1
PTPRK-205ENST00000368213 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.1
PTPRK-205ENST00000368213 PSMG3-AS1Q96PY0 264 aa8.21□□□□□ -1.1
PTPRK-205ENST00000368213 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.1
PTPRK-205ENST00000368213 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.1
PTPRK-205ENST00000368213 FAM222AQ5U5X8 452 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 C10orf99Q6UWK7 81 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 V9GYV3 84 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 TRAV26-1A0A087WT03 109 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 PATE2Q6UY27 113 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 PRRC2AP48634 2157 aaKnown RBP8.2□□□□□ -1.1
PTPRK-205ENST00000368213 DOCK11Q5JSL3 2073 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 TRBV7-3A0A075B6L6 115 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 SMIM9A6NGZ8 99 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 C11orf52Q96A22 123 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 C14orf177Q52M58 125 aa8.2□□□□□ -1.1
PTPRK-205ENST00000368213 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 C3orf79P0CE67 100 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 LINC00574Q9H8X3 128 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 MRPL36Q9P0J6 103 aaKnown RBP8.19□□□□□ -1.1
PTPRK-205ENST00000368213 DNAH12Q6ZR08 3092 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 PTPRSQ13332 1948 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 LY6G6CO95867 125 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 TRAV8-3A0A0A6YYJ7 113 aa8.19□□□□□ -1.1
PTPRK-205ENST00000368213 MORN5Q5VZ52 161 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 HIST1H2BLQ99880 126 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 ZNF106Q9H2Y7 1883 aaKnown RBP8.18□□□□□ -1.1
PTPRK-205ENST00000368213 TRAV4A0A0B4J268 109 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 UBE2AP49459 152 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 MUC22E2RYF6 1773 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-205ENST00000368213 C10orf142B7Z368 130 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 C18orf32Q8TCD1 76 aa8.18□□□□□ -1.1
PTPRK-205ENST00000368213 A0A087X0K7 114 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 MIFP14174 115 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 NDUFA1O15239 70 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 NDUFA7O95182 113 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 STPG4Q8N801 248 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 PIEZO2Q9H5I5 2752 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 Q0VG73 95 aa8.17□□□□□ -1.1
PTPRK-205ENST00000368213 RPL39LQ96EH5 51 aaKnown RBP8.17□□□□□ -1.1
PTPRK-205ENST00000368213 MED12LQ86YW9 2145 aa8.16□□□□□ -1.1
PTPRK-205ENST00000368213 EBI3Q14213 229 aa8.16□□□□□ -1.1
PTPRK-205ENST00000368213 TRAV8-4A0A0B4J246 113 aa8.16□□□□□ -1.1
PTPRK-205ENST00000368213 LINC00518Q8N0U6 118 aa8.16□□□□□ -1.1
PTPRK-205ENST00000368213 IGLV2-14P01704 120 aa8.16□□□□□ -1.1
PTPRK-205ENST00000368213 SAMD5Q5TGI4 173 aa8.16□□□□□ -1.1
PTPRK-205ENST00000368213 COLCA2A8K830 154 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 LY6LH3BQJ8 138 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 CRYGDP07320 174 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 DEFB105AQ8NG35 78 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 UTF1Q5T230 341 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 LYPD6Q86Y78 171 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 HIST3H2BBQ8N257 126 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 KMT2EQ8IZD2 1858 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 MDFICQ9P1T7 246 aa8.15□□□□□ -1.1
PTPRK-205ENST00000368213 TNCP24821 2201 aa8.15□□□□□ -1.11
PTPRK-205ENST00000368213 TIMM17AQ99595 171 aa8.15□□□□□ -1.11
PTPRK-205ENST00000368213 K7EQG2 157 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 FGF6P10767 208 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 COX11Q9Y6N1 276 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
PTPRK-205ENST00000368213 PSMB8P28062 276 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 Q6ZTI0 123 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 Q9H8V8 135 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 MRPL35Q9NZE8 188 aaKnown RBP8.14□□□□□ -1.11
PTPRK-205ENST00000368213 TRAV13-2A0A0B4J235 113 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 K7EMI3 77 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 M0R2N4 97 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 AVPP01185 164 aa8.14□□□□□ -1.11
PTPRK-205ENST00000368213 IGLV2-18A0A075B6J9 118 aa8.13□□□□□ -1.11
PTPRK-205ENST00000368213 F8VRH5 84 aa8.13□□□□□ -1.11
PTPRK-205ENST00000368213 C18orf65Q6ZTR6 163 aa8.13□□□□□ -1.11
PTPRK-205ENST00000368213 J3QQQ9 107 aa8.13□□□□□ -1.11
PTPRK-205ENST00000368213 K7EN84 100 aa8.13□□□□□ -1.11
PTPRK-205ENST00000368213 NAV3Q8IVL0 2385 aa8.13□□□□□ -1.11
PTPRK-205ENST00000368213 IGHV4-4A0A075B6R2 117 aa8.13□□□□□ -1.11
PTPRK-205ENST00000368213 IGKV2-24A0A0C4DH68 120 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 HIST1H4AP62805 103 aaKnown RBP8.12□□□□□ -1.11
PTPRK-205ENST00000368213 SPAG11BQ08648 103 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 ZNF124Q15973 351 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 C9JQL5 133 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 ABCA2Q9BZC7 2435 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 IL15RAQ13261 267 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 MYO18BQ8IUG5 2567 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms