RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TOMM6Q96B49 74 aa9.35□□□□□ -0.91
CDC42BPA-203ENST00000366766 TRAV12-2A0A075B6T6 113 aa9.35□□□□□ -0.91
CDC42BPA-203ENST00000366766 PLA2G2EQ9NZK7 142 aa9.35□□□□□ -0.91
CDC42BPA-203ENST00000366766 TEN1Q86WV5 123 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 CXCL5P42830 114 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 Q8N9W7 124 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 IGHG2P01859 326 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 ATP6V0E2Q8NHE4 81 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 GTSF1Q8WW33 167 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 PRR31Q5SQ13 230 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 IGKV1OR2-108A0A075B7D4 117 aa9.34□□□□□ -0.91
CDC42BPA-203ENST00000366766 A0A1B0GXF2 115 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 CCL24O00175 119 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 CGB3P0DN86 165 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 CGB7P0DN87 165 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 PIFOQ8TCI5 191 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 KNCNA6PVL3 124 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 E9PLD3 99 aa9.33□□□□□ -0.92
CDC42BPA-203ENST00000366766 CRYBA4P53673 196 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 ANKRD29Q8N6D5 301 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 TRBV7-3A0A075B6L6 115 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 C11orf86A6NJI1 115 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 ZFP2Q6ZN57 461 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 GAGE7O76087 117 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 PCP2Q8IVA1 136 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 C10orf105Q8TEF2 133 aa9.32□□□□□ -0.92
CDC42BPA-203ENST00000366766 K7EQD1 137 aa9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 CRLF1O75462 422 aa9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 PRB4P10163 310 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 TRBV10-1A0A0K0K1A3 114 aa9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 ZNF503Q96F45 646 aa9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 PFN2P35080 140 aa9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 Q9H8V8 135 aa9.31□□□□□ -0.92
CDC42BPA-203ENST00000366766 MORN5Q5VZ52 161 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 SEM1Q6ZVN7 128 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 K7ERJ3 54 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 GAGE6Q13070 117 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 IGHV3-16A0A0C4DH30 117 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 ODF1Q14990 250 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 U3KQE9 123 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 CENPFP49454 3210 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 GNRH2O43555 120 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 IGLL5B9A064 214 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 ZNF625Q96I27 306 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 H3BT86 120 aa9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 EIF4EBP1Q13541 118 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-203ENST00000366766 ANGP03950 147 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 C9orf66Q5T8R8 295 aa9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 DEFB112Q30KQ8 113 aa9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 PDE6GP18545 87 aa9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 Q71RC1 249 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 IGHV4-59P01825 116 aa9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 ODF3BA8MYP8 253 aa9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 MRPL23Q16540 153 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-203ENST00000366766 DEFB113Q30KQ7 82 aa9.28□□□□□ -0.92
CDC42BPA-203ENST00000366766 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
CDC42BPA-203ENST00000366766 AJUBAQ96IF1 538 aa9.28□□□□□ -0.92
CDC42BPA-203ENST00000366766 C2orf70A6NJV1 201 aa9.28□□□□□ -0.92
CDC42BPA-203ENST00000366766 INSL3P51460 131 aa9.28□□□□□ -0.92
CDC42BPA-203ENST00000366766 CCL25O15444 150 aa9.27□□□□□ -0.92
CDC42BPA-203ENST00000366766 NOP10Q9NPE3 64 aaKnown RBP9.27□□□□□ -0.92
CDC42BPA-203ENST00000366766 ATP5G1P05496 136 aa9.27□□□□□ -0.92
CDC42BPA-203ENST00000366766 MAJINQ3KP22 176 aa9.27□□□□□ -0.92
CDC42BPA-203ENST00000366766 TMEM126AQ9H061 195 aa9.27□□□□□ -0.92
CDC42BPA-203ENST00000366766 J3QKU1 62 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 ICOSQ9Y6W8 199 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 SMIM20Q8N5G0 67 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 BAALCQ8WXS3 180 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 SPRNQ5BIV9 151 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 MLST8Q9BVC4 326 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGHV4-61A0A0C4DH41 118 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 TRACP01848 142 aa9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 RPL39LQ96EH5 51 aaKnown RBP9.27□□□□□ -0.93
CDC42BPA-203ENST00000366766 SIRPDQ9H106 197 aa9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGKV1D-37A0A075B6S9 117 aa9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 TMEM263Q8WUH6 116 aaKnown RBP9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 JMJD7-PLA2G4BH0Y9G9 81 aa9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 RITA1Q96K30 269 aa9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 FANCD2OSQ96PS1 177 aa9.26□□□□□ -0.93
CDC42BPA-203ENST00000366766 BAALC-AS2P0C853 105 aa9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 WT1P19544 449 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 H7C423 109 aa9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 Q8N7P7 452 aa9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 ADORA2A-AS1P86434 159 aa9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 MUC4Q99102 2169 aa9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 ATOX1O00244 68 aa9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
CDC42BPA-203ENST00000366766 Q8N1Y9 231 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 MDFICQ9P1T7 246 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 COX7A2LO14548 114 aa9.24□□□□□ -0.93
CDC42BPA-203ENST00000366766 IGF1P05019 195 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms