RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NUP35Q8NFH5 326 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 OR5H6Q8NGV6 325 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 MT1LQ93083 61 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 PRR15LQ9BU68 103 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 IL20Q9NYY1 176 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 DCHS1Q96JQ0 3298 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 WDFY4Q6ZS81 3184 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 DNAH8Q96JB1 4490 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 DLC1Q96QB1 1528 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 LOC107986453A0A1B0GWG9 222 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 H3BQV1 296 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 MT1EP04732 61 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 BCL2P10415 239 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 SPCS2Q15005 226 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 LRTM1Q9HBL6 345 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 NHSL1Q5SYE7 1610 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 DNAJC13O75165 2243 aa-1.08□□□□□ -2.58
RNU4-28P-201ENST00000364739 KNDC1Q76NI1 1749 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 A0A0G2JMM0 328 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 ASIPP42127 132 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 IDO2Q6ZQW0 420 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 OR13C6PQ8NH95 151 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 DSCR8Q96T75 97 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 PLCE1Q9P212 2302 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 TECPR2O15040 1411 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 SOGA1O94964 1423 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 TRAPPC8Q9Y2L5 1435 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 LAMC3Q9Y6N6 1575 aa-1.09□□□□□ -2.58
RNU4-28P-201ENST00000364739 H3BNG1 76 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 M0R3E3 92 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 TPT1P13693 172 aaKnown RBP-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 SPRR1AP35321 89 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 DNAJB13P59910 316 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 MAXP61244 160 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 FADDQ13158 208 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 DEFB135Q30KP9 77 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 OR8J3Q8NGG0 315 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 PRELID3AQ96N28 172 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 CDC42BPGQ6DT37 1551 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 BICRAQ9NZM4 1560 aa-1.1□□□□□ -2.59
RNU4-28P-201ENST00000364739 TCOF1Q13428 1488 aaKnown RBP-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 BLMP54132 1417 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 EDF1O60869 148 aaKnown RBP-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 GLRXP35754 106 aa-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 ISOC1Q96CN7 298 aa-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 DMAC1Q96GE9 116 aa-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 PPRC1Q5VV67 1664 aaKnown RBP-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 VPS13CQ709C8 3753 aa-1.11□□□□□ -2.59
RNU4-28P-201ENST00000364739 TSC2P49815 1807 aa-1.12□□□□□ -2.59
RNU4-28P-201ENST00000364739 A0A087WTM6 91 aa-1.12□□□□□ -2.59
RNU4-28P-201ENST00000364739 IFNA1P01562 189 aa-1.12□□□□□ -2.59
RNU4-28P-201ENST00000364739 TMED2Q15363 201 aa-1.12□□□□□ -2.59
RNU4-28P-201ENST00000364739 SMIM20Q8N5G0 67 aa-1.12□□□□□ -2.59
RNU4-28P-201ENST00000364739 MED11Q9P086 117 aa-1.12□□□□□ -2.59
RNU4-28P-201ENST00000364739 MPC1Q9Y5U8 109 aa-1.12□□□□□ -2.59
RNU4-28P-201ENST00000364739 SPAARA0A1B0GVQ0 90 aa-1.13□□□□□ -2.59
RNU4-28P-201ENST00000364739 TRDV1A0A1B0GX56 115 aa-1.13□□□□□ -2.59
RNU4-28P-201ENST00000364739 GABARAPH6UMI1 98 aa-1.13□□□□□ -2.59
RNU4-28P-201ENST00000364739 SAA1P0DJI8 122 aaPredicted RBP-1.13□□□□□ -2.59
RNU4-28P-201ENST00000364739 KRTAP19-5Q3LI72 72 aa-1.13□□□□□ -2.59
RNU4-28P-201ENST00000364739 ANKRD50Q9ULJ7 1429 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 WDFY3Q8IZQ1 3526 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 TMEM189A5PLL7 270 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 GNG3P63215 75 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 LELP1Q5T871 98 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 TEX29Q8N6K0 151 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 RANBP2P49792 3224 aaKnown RBP-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 CFAP54Q96N23 3096 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 VCANP13611 3396 aa-1.14□□□□□ -2.59
RNU4-28P-201ENST00000364739 H0YGG7 62 aa-1.15□□□□□ -2.59
RNU4-28P-201ENST00000364739 H7BYZ3 331 aa-1.15□□□□□ -2.59
RNU4-28P-201ENST00000364739 GTF2A1P52655 376 aaPredicted RBP-1.15□□□□□ -2.59
RNU4-28P-201ENST00000364739 ATG5Q9H1Y0 275 aa-1.15□□□□□ -2.59
RNU4-28P-201ENST00000364739 C19orf12Q9NSK7 152 aa-1.15□□□□□ -2.59
RNU4-28P-201ENST00000364739 MKI67P46013 3256 aaKnown RBP-1.15□□□□□ -2.59
RNU4-28P-201ENST00000364739 BCL9LQ86UU0 1499 aa-1.16□□□□□ -2.59
RNU4-28P-201ENST00000364739 VIRMAQ69YN4 1812 aaKnown RBP-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 C9JAW5 83 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 F2Z2F3 143 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 CCKP06307 115 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 RPS29P62273 56 aaKnown RBP-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 RHOHQ15669 191 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 CCSMST1Q4G0I0 132 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 CYP4F30PQ9H0H9 118 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 S4R3F8 94 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 LRP5O75197 1615 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 BIVM-ERCC5R4GMW8 1640 aa-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 TROQ12816 1431 aaPredicted RBP-1.16□□□□□ -2.6
RNU4-28P-201ENST00000364739 SZT2Q5T011 3432 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 MUC3AQ02505 3323 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 FER1L6Q2WGJ9 1857 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 C9orf92A6NGG3 77 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 DEFB4AO15263 64 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 SDC2P34741 201 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 MRPS25P82663 173 aaKnown RBP-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 OR5A2Q8NGI9 324 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 NUBP2Q9Y5Y2 271 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 FAM135BQ49AJ0 1406 aa-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 CASKIN1Q8WXD9 1431 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms