RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 Q8N377 158 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 C10orf126Q8N4M7 172 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR4C5Q8NGB2 326 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR5C1Q8NGR4 320 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 HYLS1Q96M11 299 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 SPXQ9BT56 116 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 RPH3ALQ9UNE2 315 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 TRBV7-9A0A0J9YWB2 115 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 RBAKDNA6NC62 111 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 F6UZH7 168 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 M0R2P5 195 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 SIX6O95475 246 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR10J3Q5JRS4 329 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 Q6AWC8 147 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 Q8N814 137 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 TMEM70Q9BUB7 260 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 WDR61Q9GZS3 305 aaKnown RBP3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR5AC2Q9NZP5 309 aa3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 SRRM2Q9UQ35 2752 aaKnown RBP3.42□□□□□ -1.86
RNU4-4P-201ENST00000364588 TRAV8-1A0A0A6YYK1 113 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGHV3-73A0A0B4J1V6 119 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 TRAV8-6A0A0B4J262 113 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 PGPA6NDG6 321 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 IBA57-AS1B1ANH7 110 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 C17orf112F2Z3M2 114 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 LECT2O14960 151 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 TYMSP04818 313 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 WFDC2Q14508 124 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 TDRG1Q3Y452 100 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 LINC01556Q5JQF7 62 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 GOLT1AQ6ZVE7 132 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 SLC25A29Q8N8R3 303 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 TVP23CQ96ET8 276 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 SMIM3Q9BZL3 60 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 KCNIP2Q9NS61 270 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 TRAV21A0A0B4J279 112 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 HMGB3O15347 200 aaKnown RBP3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 PFN1P07737 140 aaKnown RBP3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 TAS2R45P59539 299 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 GNG5P63218 68 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 KHDC3LQ587J8 217 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 DPPA3Q6W0C5 159 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 CMTM2Q8TAZ6 248 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 ASB13Q8WXK3 278 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 ATP5SQ99766 215 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 PRADC1Q9BSG0 188 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 NMES1Q9C002 83 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 TREM1Q9NP99 234 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 OTORQ9NRC9 128 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 MBD2Q9UBB5 411 aa3.4□□□□□ -1.87
RNU4-4P-201ENST00000364588 RS1O15537 224 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 ZNF80P51504 273 aaPredicted RBP3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 RHOHQ15669 191 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 FAM74A1Q5RGS3 127 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 LELP1Q5T871 98 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 CFAP126Q5VTH2 177 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 TMEM75Q8N9X5 138 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 ATP6V0E2Q8NHE4 81 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 SCGB1C1Q8TD33 95 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 KCNS1Q96KK3 526 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 CCDC32Q9BV29 185 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 GTSF1LQ9H1H1 148 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 HSPB11Q9Y547 144 aa3.39□□□□□ -1.87
RNU4-4P-201ENST00000364588 TRBV6-4A0A1B0GX49 114 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 A0A1W2PPV4 95 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 GCGP01275 180 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 C1QBP02746 253 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 H2BFSP57053 126 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 RAB2AP61019 212 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 ASAH1Q13510 395 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 LAGE3Q14657 143 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 ACOT6Q3I5F7 207 aaPredicted RBP3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 ZNF506Q5JVG8 444 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 Q6ZSA8 131 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 SCXQ7RTU7 201 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 DAZ4Q86SG3 579 aaKnown RBP3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 ENKURQ8TC29 256 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 PPP1R1CQ8WVI7 109 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 BAALCQ8WXS3 180 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 C2orf48Q96LS8 159 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 C9orf85Q96MD7 179 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 NDFIP1Q9BT67 221 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 WFDC1Q9HC57 220 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 DAZ3Q9NR90 486 aaKnown RBP3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 PRR34Q9NV39 138 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 Q9UF83 564 aa3.38□□□□□ -1.87
RNU4-4P-201ENST00000364588 DNAH8Q96JB1 4490 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 TRAV8-3A0A0A6YYJ7 113 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 RBFOX3A6NFN3 312 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 TAAR5O14804 337 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 MPC2O95563 127 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 ARL14EPLP0DKL9 152 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms