RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 XCL1P47992 114 aa10.33□□□□□ -0.76
LDB3-202ENST00000361373 IL17DQ8TAD2 202 aa10.33□□□□□ -0.76
LDB3-202ENST00000361373 MUC22E2RYF6 1773 aaPredicted RBP10.33□□□□□ -0.76
LDB3-202ENST00000361373 IGF2RP11717 2491 aa10.33□□□□□ -0.76
LDB3-202ENST00000361373 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
LDB3-202ENST00000361373 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
LDB3-202ENST00000361373 CCDC168Q8NDH2 2452 aa10.32□□□□□ -0.76
LDB3-202ENST00000361373 TRBV7-3A0A075B6L6 115 aa10.32□□□□□ -0.76
LDB3-202ENST00000361373 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
LDB3-202ENST00000361373 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
LDB3-202ENST00000361373 PRSS47A8MTI9 375 aa10.32□□□□□ -0.76
LDB3-202ENST00000361373 UNQ9165/PRO28630Q6UXU0 137 aa10.32□□□□□ -0.76
LDB3-202ENST00000361373 CHD3Q12873 2000 aaKnown RBP10.32□□□□□ -0.76
LDB3-202ENST00000361373 WFDC11Q8NEX6 87 aa10.32□□□□□ -0.76
LDB3-202ENST00000361373 TMEM263Q8WUH6 116 aaKnown RBP10.32□□□□□ -0.76
LDB3-202ENST00000361373 ZFP2Q6ZN57 461 aa10.32□□□□□ -0.76
LDB3-202ENST00000361373 CCDC140Q96MF4 163 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 IFITM1P13164 125 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 SCRT2Q9NQ03 307 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 KMT2EQ8IZD2 1858 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 HHLA3Q9XRX5 114 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 IGKV1D-37A0A075B6S9 117 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 LY6LH3BQJ8 138 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 DKK2Q9UBU2 259 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 MED12LQ86YW9 2145 aa10.31□□□□□ -0.76
LDB3-202ENST00000361373 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
LDB3-202ENST00000361373 Q6ZQT7 251 aa10.3□□□□□ -0.76
LDB3-202ENST00000361373 KLK5Q9Y337 293 aaPredicted RBP10.3□□□□□ -0.76
LDB3-202ENST00000361373 CRLF1O75462 422 aa10.3□□□□□ -0.76
LDB3-202ENST00000361373 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
LDB3-202ENST00000361373 ASPHD1Q5U4P2 390 aa10.3□□□□□ -0.76
LDB3-202ENST00000361373 CLPSL2Q6UWE3 100 aa10.3□□□□□ -0.76
LDB3-202ENST00000361373 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
LDB3-202ENST00000361373 COX7A2LO14548 114 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 RPL39LQ96EH5 51 aaKnown RBP10.29□□□□□ -0.76
LDB3-202ENST00000361373 CRIP3Q6Q6R5 217 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 CEND1Q8N111 149 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 MAP6D1Q9H9H5 199 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 TRBV12-3P01733 135 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 CRYGBP07316 175 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 GATA1P15976 413 aaPredicted RBP10.29□□□□□ -0.76
LDB3-202ENST00000361373 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 FGF6P10767 208 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 BRWD1-AS2P59051 145 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 Q6ZVH6 145 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 Q9H8V8 135 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 DSCAMO60469 2012 aa10.29□□□□□ -0.76
LDB3-202ENST00000361373 HIST1H4AP62805 103 aaKnown RBP10.28□□□□□ -0.76
LDB3-202ENST00000361373 DEFB135Q30KP9 77 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
LDB3-202ENST00000361373 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 TNCP24821 2201 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 EIF4EBP1Q13541 118 aaPredicted RBP10.28□□□□□ -0.76
LDB3-202ENST00000361373 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 GAGE2AQ6NT46 116 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 Q9HAA7 133 aa10.28□□□□□ -0.76
LDB3-202ENST00000361373 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.76
LDB3-202ENST00000361373 AMTNQ6UX39 209 aa10.27□□□□□ -0.76
LDB3-202ENST00000361373 GTSF1Q8WW33 167 aa10.27□□□□□ -0.76
LDB3-202ENST00000361373 ANAPC13Q9BS18 74 aa10.27□□□□□ -0.76
LDB3-202ENST00000361373 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
LDB3-202ENST00000361373 CAMK2N2Q96S95 79 aa10.27□□□□□ -0.77
LDB3-202ENST00000361373 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
LDB3-202ENST00000361373 UTF1Q5T230 341 aa10.27□□□□□ -0.77
LDB3-202ENST00000361373 UBE2BP63146 152 aa10.27□□□□□ -0.77
LDB3-202ENST00000361373 C5orf38Q86SI9 138 aa10.27□□□□□ -0.77
LDB3-202ENST00000361373 EDA2RQ9HAV5 297 aa10.27□□□□□ -0.77
LDB3-202ENST00000361373 TRAV4A0A0B4J268 109 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 BVES-AS1Q5T3Y7 98 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 Q6ZPA2 131 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 K7EQG2 157 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 OCIAD2Q56VL3 154 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 LURAP1LQ8IV03 231 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 CXCL5P42830 114 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
LDB3-202ENST00000361373 SPRY2O43597 315 aa10.25□□□□□ -0.77
LDB3-202ENST00000361373 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
LDB3-202ENST00000361373 ALPK3Q96L96 1907 aa10.25□□□□□ -0.77
LDB3-202ENST00000361373 LINC01548A6NM66 108 aa10.25□□□□□ -0.77
LDB3-202ENST00000361373 F8W1H4 67 aa10.25□□□□□ -0.77
LDB3-202ENST00000361373 CEP192Q8TEP8 1941 aa10.25□□□□□ -0.77
LDB3-202ENST00000361373 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
LDB3-202ENST00000361373 TLN1Q9Y490 2541 aaKnown RBP10.24□□□□□ -0.77
LDB3-202ENST00000361373 F8W735 103 aaPredicted RBP10.24□□□□□ -0.77
LDB3-202ENST00000361373 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
LDB3-202ENST00000361373 Q6ZSV7 163 aa10.24□□□□□ -0.77
LDB3-202ENST00000361373 NUP210LQ5VU65 1888 aa10.24□□□□□ -0.77
LDB3-202ENST00000361373 A0A0J9YXV3 536 aa10.24□□□□□ -0.77
LDB3-202ENST00000361373 PSMG3-AS1Q96PY0 264 aa10.23□□□□□ -0.77
LDB3-202ENST00000361373 HIVEP3Q5T1R4 2406 aa10.23□□□□□ -0.77
LDB3-202ENST00000361373 DSCR8Q96T75 97 aa10.23□□□□□ -0.77
LDB3-202ENST00000361373 PRR14LQ5THK1 2151 aa10.23□□□□□ -0.77
LDB3-202ENST00000361373 INAFM1C9JVW0 142 aa10.23□□□□□ -0.77
LDB3-202ENST00000361373 RBMY1FQ15415 496 aaKnown RBP10.23□□□□□ -0.77
LDB3-202ENST00000361373 TOMM6Q96B49 74 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms