RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 ICOSQ9Y6W8 199 aa15.96■□□□□ 0.15
NCKAP1-201ENST00000360982 SMAD5-AS1Q9Y6J3 95 aa15.96■□□□□ 0.14
NCKAP1-201ENST00000360982 SPANXDQ9BXN6 97 aa15.95■□□□□ 0.14
NCKAP1-201ENST00000360982 C2orf16Q68DN1 1984 aa15.95■□□□□ 0.14
NCKAP1-201ENST00000360982 MYO9AB2RTY4 2548 aa15.95■□□□□ 0.14
NCKAP1-201ENST00000360982 EGR2P11161 476 aaPredicted RBP15.94■□□□□ 0.14
NCKAP1-201ENST00000360982 WISP2O76076 250 aa15.93■□□□□ 0.14
NCKAP1-201ENST00000360982 FXYD2P54710 66 aa15.93■□□□□ 0.14
NCKAP1-201ENST00000360982 LMO4P61968 165 aa15.93■□□□□ 0.14
NCKAP1-201ENST00000360982 C4orf3Q8WVX3 66 aa15.93■□□□□ 0.14
NCKAP1-201ENST00000360982 ARHGAP21Q5T5U3 1957 aa15.93■□□□□ 0.14
NCKAP1-201ENST00000360982 MORN5Q5VZ52 161 aa15.93■□□□□ 0.14
NCKAP1-201ENST00000360982 ATP6V0E2Q8NHE4 81 aa15.92■□□□□ 0.14
NCKAP1-201ENST00000360982 LTBP2Q14767 1821 aa15.92■□□□□ 0.14
NCKAP1-201ENST00000360982 A6NDX4 124 aa15.92■□□□□ 0.14
NCKAP1-201ENST00000360982 MSMPQ1L6U9 139 aa15.92■□□□□ 0.14
NCKAP1-201ENST00000360982 CFHR4Q92496 578 aa15.92■□□□□ 0.14
NCKAP1-201ENST00000360982 RITA1Q96K30 269 aa15.92■□□□□ 0.14
NCKAP1-201ENST00000360982 Q9HAA7 133 aa15.91■□□□□ 0.14
NCKAP1-201ENST00000360982 IGLV2-23P01705 113 aa15.91■□□□□ 0.14
NCKAP1-201ENST00000360982 GYPEP15421 78 aa15.91■□□□□ 0.14
NCKAP1-201ENST00000360982 CITED2Q99967 270 aaPredicted RBP15.9■□□□□ 0.14
NCKAP1-201ENST00000360982 INAFM2P0DMQ5 153 aa15.9■□□□□ 0.14
NCKAP1-201ENST00000360982 RPL32P62910 135 aaKnown RBP15.9■□□□□ 0.14
NCKAP1-201ENST00000360982 UBE2BP63146 152 aa15.9■□□□□ 0.14
NCKAP1-201ENST00000360982 CLPSL2Q6UWE3 100 aa15.89■□□□□ 0.14
NCKAP1-201ENST00000360982 NACAE9PAV3 2078 aa15.89■□□□□ 0.13
NCKAP1-201ENST00000360982 TRACP01848 142 aa15.89■□□□□ 0.13
NCKAP1-201ENST00000360982 PRR14LQ5THK1 2151 aa15.89■□□□□ 0.13
NCKAP1-201ENST00000360982 ADAMTS9Q9P2N4 1935 aa15.89■□□□□ 0.13
NCKAP1-201ENST00000360982 DNAJC9-AS1A6NH13 148 aa15.89■□□□□ 0.13
NCKAP1-201ENST00000360982 XCL1P47992 114 aa15.89■□□□□ 0.13
NCKAP1-201ENST00000360982 C11orf1Q9H5F2 150 aa15.89■□□□□ 0.13
NCKAP1-201ENST00000360982 TEX22C9J3V5 150 aa15.88■□□□□ 0.13
NCKAP1-201ENST00000360982 FOXI1Q12951 378 aa15.88■□□□□ 0.13
NCKAP1-201ENST00000360982 IL17DQ8TAD2 202 aa15.88■□□□□ 0.13
NCKAP1-201ENST00000360982 TEN1Q86WV5 123 aa15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 KLK5Q9Y337 293 aaPredicted RBP15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 J3QQQ9 107 aa15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 SPATA12Q7Z6I5 190 aa15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 NCKAP5O14513 1909 aa15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 TRAV13-2A0A0B4J235 113 aa15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 C19orf84I3L1E1 186 aa15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 TLN1Q9Y490 2541 aaKnown RBP15.87■□□□□ 0.13
NCKAP1-201ENST00000360982 Q6ZQT7 251 aa15.86■□□□□ 0.13
NCKAP1-201ENST00000360982 DAZ2Q13117 558 aaKnown RBP15.86■□□□□ 0.13
NCKAP1-201ENST00000360982 DAZ4Q86SG3 579 aaKnown RBP15.86■□□□□ 0.13
NCKAP1-201ENST00000360982 DAZ3Q9NR90 486 aaKnown RBP15.86■□□□□ 0.13
NCKAP1-201ENST00000360982 FSTL3O95633 263 aa15.86■□□□□ 0.13
NCKAP1-201ENST00000360982 WI2-2373I1.2A0A1W2PRP0 233 aa15.86■□□□□ 0.13
NCKAP1-201ENST00000360982 CARD19Q96LW7 228 aa15.86■□□□□ 0.13
NCKAP1-201ENST00000360982 ANKRD29Q8N6D5 301 aa15.85■□□□□ 0.13
NCKAP1-201ENST00000360982 K7EQD1 137 aa15.85■□□□□ 0.13
NCKAP1-201ENST00000360982 SOCS3O14543 225 aa15.85■□□□□ 0.13
NCKAP1-201ENST00000360982 PATE2Q6UY27 113 aa15.85■□□□□ 0.13
NCKAP1-201ENST00000360982 TTTY13Q9BZ97 58 aa15.85■□□□□ 0.13
NCKAP1-201ENST00000360982 HIGD1BQ9P298 99 aa15.85■□□□□ 0.13
NCKAP1-201ENST00000360982 PIEZO2Q9H5I5 2752 aa15.85■□□□□ 0.13
NCKAP1-201ENST00000360982 CENPFP49454 3210 aa15.84■□□□□ 0.13
NCKAP1-201ENST00000360982 UTF1Q5T230 341 aa15.84■□□□□ 0.13
NCKAP1-201ENST00000360982 NCOA6Q14686 2063 aaPredicted RBP15.84■□□□□ 0.13
NCKAP1-201ENST00000360982 TMEM61Q8N0U2 210 aa15.84■□□□□ 0.13
NCKAP1-201ENST00000360982 ZNF843Q8N446 348 aa15.84■□□□□ 0.13
NCKAP1-201ENST00000360982 CTRLP40313 264 aa15.83■□□□□ 0.13
NCKAP1-201ENST00000360982 COL4A3Q01955 1670 aa15.83■□□□□ 0.12
NCKAP1-201ENST00000360982 CFC1BP0CG36 223 aa15.83■□□□□ 0.12
NCKAP1-201ENST00000360982 CFC1P0CG37 223 aa15.83■□□□□ 0.12
NCKAP1-201ENST00000360982 DEFB135Q30KP9 77 aa15.83■□□□□ 0.12
NCKAP1-201ENST00000360982 ODF3L1Q8IXM7 274 aa15.83■□□□□ 0.12
NCKAP1-201ENST00000360982 SLC25A29Q8N8R3 303 aa15.83■□□□□ 0.12
NCKAP1-201ENST00000360982 C9orf47Q6ZRZ4 202 aa15.82■□□□□ 0.12
NCKAP1-201ENST00000360982 WFDC11Q8NEX6 87 aa15.82■□□□□ 0.12
NCKAP1-201ENST00000360982 TM2D2Q9BX73 214 aa15.82■□□□□ 0.12
NCKAP1-201ENST00000360982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.82■□□□□ 0.12
NCKAP1-201ENST00000360982 IGKV2-29A2NJV5 120 aaPredicted RBP15.82■□□□□ 0.12
NCKAP1-201ENST00000360982 SPANXCQ9NY87 97 aa15.82■□□□□ 0.12
NCKAP1-201ENST00000360982 CRLF1O75462 422 aa15.81■□□□□ 0.12
NCKAP1-201ENST00000360982 NDUFA11Q86Y39 141 aa15.81■□□□□ 0.12
NCKAP1-201ENST00000360982 IGHV4-31P0DP07 118 aa15.81■□□□□ 0.12
NCKAP1-201ENST00000360982 RNASE13Q5GAN3 156 aaKnown RBP15.81■□□□□ 0.12
NCKAP1-201ENST00000360982 DSCAMO60469 2012 aa15.81■□□□□ 0.12
NCKAP1-201ENST00000360982 IGHG4P01861 327 aa15.8■□□□□ 0.12
NCKAP1-201ENST00000360982 CAMK2N2Q96S95 79 aa15.8■□□□□ 0.12
NCKAP1-201ENST00000360982 HERV-K104P63124 156 aa15.8■□□□□ 0.12
NCKAP1-201ENST00000360982 RNF183Q96D59 192 aa15.8■□□□□ 0.12
NCKAP1-201ENST00000360982 LINC00574Q9H8X3 128 aa15.79■□□□□ 0.12
NCKAP1-201ENST00000360982 C5orf38Q86SI9 138 aa15.79■□□□□ 0.12
NCKAP1-201ENST00000360982 ODF3BA8MYP8 253 aa15.79■□□□□ 0.12
NCKAP1-201ENST00000360982 F8W735 103 aaPredicted RBP15.78■□□□□ 0.12
NCKAP1-201ENST00000360982 SUMO4Q6EEV6 95 aa15.78■□□□□ 0.12
NCKAP1-201ENST00000360982 FANCD2OSQ96PS1 177 aa15.78■□□□□ 0.12
NCKAP1-201ENST00000360982 CHD8Q9HCK8 2581 aa15.78■□□□□ 0.12
NCKAP1-201ENST00000360982 Q8N1Y9 231 aa15.78■□□□□ 0.12
NCKAP1-201ENST00000360982 HHLA3Q9XRX5 114 aa15.78■□□□□ 0.12
NCKAP1-201ENST00000360982 GTSF1Q8WW33 167 aa15.78■□□□□ 0.12
NCKAP1-201ENST00000360982 COX7A2LO14548 114 aa15.77■□□□□ 0.12
NCKAP1-201ENST00000360982 Q6YL49 198 aa15.77■□□□□ 0.12
NCKAP1-201ENST00000360982 TP73-AS1Q9UF72 201 aa15.77■□□□□ 0.12
NCKAP1-201ENST00000360982 TNRC6AQ8NDV7 1962 aaKnown RBP15.77■□□□□ 0.12
NCKAP1-201ENST00000360982 RBMY1FQ15415 496 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms