RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ANKRD39Q53RE8 183 aa10.44□□□□□ -0.74
SRGAP3-201ENST00000360413 C17orf77Q96MU5 243 aa10.44□□□□□ -0.74
SRGAP3-201ENST00000360413 NDUFA1O15239 70 aa10.44□□□□□ -0.74
SRGAP3-201ENST00000360413 TRBV10-2A0A0K0K1G8 114 aa10.44□□□□□ -0.74
SRGAP3-201ENST00000360413 UQCRQO14949 82 aa10.44□□□□□ -0.74
SRGAP3-201ENST00000360413 EXPH5Q8NEV8 1989 aa10.44□□□□□ -0.74
SRGAP3-201ENST00000360413 C2CD3Q4AC94 2353 aa10.44□□□□□ -0.74
SRGAP3-201ENST00000360413 H3BRN7 92 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 IGKV1-39P01597 117 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 IGKV1D-39P04432 117 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 IGKV1-6A0A0C4DH72 117 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 CCL24O00175 119 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 NUPR1O60356 82 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 NDUFC2-KCTD14E9PQ53 114 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 LYPD6BQ8NI32 183 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 J3QKU1 62 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
SRGAP3-201ENST00000360413 TRAV23DV6A0A075B6W5 121 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 VOPP1Q96AW1 172 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 TMEM105Q8N8V8 129 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 SND1-IT1Q9HBX3 110 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 CD59P13987 128 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 ZNRD1Q9P1U0 126 aa10.42□□□□□ -0.74
SRGAP3-201ENST00000360413 PINLYPA6NC86 204 aa10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 EPOPA6NHQ4 379 aa10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 SPANXB1Q9NS25 103 aaPredicted RBP10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 K7EM74 188 aa10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 PRDM6Q9NQX0 595 aa10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
SRGAP3-201ENST00000360413 K7ENP7 123 aa10.4□□□□□ -0.74
SRGAP3-201ENST00000360413 K7EQD1 137 aa10.4□□□□□ -0.74
SRGAP3-201ENST00000360413 IGFL3Q6UXB1 125 aa10.4□□□□□ -0.75
SRGAP3-201ENST00000360413 E7EQL1 145 aa10.4□□□□□ -0.75
SRGAP3-201ENST00000360413 H3BT86 120 aa10.4□□□□□ -0.75
SRGAP3-201ENST00000360413 LINC00643Q86TS7 51 aa10.4□□□□□ -0.75
SRGAP3-201ENST00000360413 UPK3BQ9BT76 320 aa10.4□□□□□ -0.75
SRGAP3-201ENST00000360413 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
SRGAP3-201ENST00000360413 Q9HAA7 133 aa10.39□□□□□ -0.75
SRGAP3-201ENST00000360413 TRBV12-3P01733 135 aa10.39□□□□□ -0.75
SRGAP3-201ENST00000360413 HIST2H2BCQ6DN03 193 aa10.39□□□□□ -0.75
SRGAP3-201ENST00000360413 PTH2Q96A98 100 aa10.39□□□□□ -0.75
SRGAP3-201ENST00000360413 IGKV4-1P06312 121 aa10.39□□□□□ -0.75
SRGAP3-201ENST00000360413 WDR86Q86TI4 376 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 PTPRBP23467 1997 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 WISP1O95388 367 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 LYPD2Q6UXB3 125 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 PTPRSQ13332 1948 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 FANCD2OSQ96PS1 177 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 DAND5Q8N907 189 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 FLVCR1-AS1Q8TAF5 88 aa10.38□□□□□ -0.75
SRGAP3-201ENST00000360413 TRBV7-3A0A075B6L6 115 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 COL8A2P25067 703 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 INSL3P51460 131 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 USP17L23D6RBM5 183 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 SEM1Q6ZVN7 128 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 KAAG1Q9UBP8 84 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 A0A096LPF7 62 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 GYPEP15421 78 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 Q71RC1 249 aaPredicted RBP10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 H0Y9J4 135 aa10.37□□□□□ -0.75
SRGAP3-201ENST00000360413 LYPD6Q86Y78 171 aa10.36□□□□□ -0.75
SRGAP3-201ENST00000360413 C20orf197Q8N268 126 aa10.36□□□□□ -0.75
SRGAP3-201ENST00000360413 F8P00451 2351 aa10.36□□□□□ -0.75
SRGAP3-201ENST00000360413 GNRH2O43555 120 aa10.36□□□□□ -0.75
SRGAP3-201ENST00000360413 IGHV1-58A0A0C4DH39 117 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 LECT2O14960 151 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 TCL1BO95988 128 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 C1orf195Q5TG92 126 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 MLST8Q9BVC4 326 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 WFDC11Q8NEX6 87 aa10.35□□□□□ -0.75
SRGAP3-201ENST00000360413 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.34□□□□□ -0.75
SRGAP3-201ENST00000360413 WI2-2373I1.2A0A1W2PRP0 233 aa10.34□□□□□ -0.75
SRGAP3-201ENST00000360413 WT1-ASQ06250 92 aa10.34□□□□□ -0.75
SRGAP3-201ENST00000360413 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
SRGAP3-201ENST00000360413 FAM110AQ9BQ89 295 aa10.34□□□□□ -0.75
SRGAP3-201ENST00000360413 RUSC1-AS1Q66K80 236 aa10.33□□□□□ -0.76
SRGAP3-201ENST00000360413 TEX49A0A1B0GTD5 131 aa10.33□□□□□ -0.76
SRGAP3-201ENST00000360413 SPATA12Q7Z6I5 190 aa10.33□□□□□ -0.76
SRGAP3-201ENST00000360413 GP9P14770 177 aa10.33□□□□□ -0.76
SRGAP3-201ENST00000360413 TTTY13Q9BZ97 58 aa10.33□□□□□ -0.76
SRGAP3-201ENST00000360413 E9PLD3 99 aa10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 Q0VFX4 171 aa10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 ARTNQ5T4W7 220 aa10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 FGF23Q9GZV9 251 aaPredicted RBP10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms