RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 MUC4Q99102 2169 aa16.71■□□□□ 0.27
CCSER2-202ENST00000359979 JPT2Q9H910 190 aa16.71■□□□□ 0.27
CCSER2-202ENST00000359979 TMEM89A2RUT3 159 aa16.71■□□□□ 0.27
CCSER2-202ENST00000359979 C11orf86A6NJI1 115 aa16.71■□□□□ 0.27
CCSER2-202ENST00000359979 B4DSR2 109 aa16.71■□□□□ 0.27
CCSER2-202ENST00000359979 PRB1P04280 392 aa16.71■□□□□ 0.27
CCSER2-202ENST00000359979 GATA3P23771 443 aa16.7■□□□□ 0.26
CCSER2-202ENST00000359979 SCGB1D4Q6XE38 83 aa16.7■□□□□ 0.26
CCSER2-202ENST00000359979 SPANXB1Q9NS25 103 aaPredicted RBP16.7■□□□□ 0.26
CCSER2-202ENST00000359979 A0A087WWL8 130 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 IGHV3-16A0A0C4DH30 117 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 SDHAF1A6NFY7 115 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 H3BMG7 143 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 MORN3Q6PF18 240 aaPredicted RBP16.69■□□□□ 0.26
CCSER2-202ENST00000359979 AKAP6Q13023 2319 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 FAM208BQ5VWN6 2430 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 F5H697 171 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 SYT8Q8NBV8 401 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 AGRNO00468 2067 aa16.69■□□□□ 0.26
CCSER2-202ENST00000359979 SNRPD3P62318 126 aaKnown RBP16.68■□□□□ 0.26
CCSER2-202ENST00000359979 WFDC2Q14508 124 aa16.68■□□□□ 0.26
CCSER2-202ENST00000359979 A0A0J9YX75 114 aa16.68■□□□□ 0.26
CCSER2-202ENST00000359979 AVPP01185 164 aa16.68■□□□□ 0.26
CCSER2-202ENST00000359979 UBE2D1P51668 147 aa16.68■□□□□ 0.26
CCSER2-202ENST00000359979 CD300EQ496F6 205 aaPredicted RBP16.68■□□□□ 0.26
CCSER2-202ENST00000359979 PLEKHB2Q96CS7 222 aa16.68■□□□□ 0.26
CCSER2-202ENST00000359979 J3QR89 54 aa16.67■□□□□ 0.26
CCSER2-202ENST00000359979 GAGE13Q4V321 117 aa16.67■□□□□ 0.26
CCSER2-202ENST00000359979 ZNF462Q96JM2 2506 aa16.66■□□□□ 0.26
CCSER2-202ENST00000359979 SRSF9Q13242 221 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCSER2-202ENST00000359979 RPL39P62891 51 aaKnown RBP16.66■□□□□ 0.26
CCSER2-202ENST00000359979 TMEM95Q3KNT9 176 aa16.66■□□□□ 0.26
CCSER2-202ENST00000359979 ZNF876PQ49A33 203 aa16.66■□□□□ 0.26
CCSER2-202ENST00000359979 WFDC12Q8WWY7 111 aa16.66■□□□□ 0.26
CCSER2-202ENST00000359979 PRO0461Q9UI25 63 aa16.66■□□□□ 0.26
CCSER2-202ENST00000359979 ZNF688P0C7X2 276 aa16.65■□□□□ 0.26
CCSER2-202ENST00000359979 PGPEP1Q9NXJ5 209 aa16.65■□□□□ 0.26
CCSER2-202ENST00000359979 K7EQG2 157 aa16.65■□□□□ 0.26
CCSER2-202ENST00000359979 RHOHQ15669 191 aa16.65■□□□□ 0.26
CCSER2-202ENST00000359979 AMTNQ6UX39 209 aa16.65■□□□□ 0.26
CCSER2-202ENST00000359979 KLHL30-AS1Q8NEE0 82 aa16.65■□□□□ 0.26
CCSER2-202ENST00000359979 M0QY20 66 aa16.64■□□□□ 0.25
CCSER2-202ENST00000359979 DSCR9P59020 149 aa16.64■□□□□ 0.25
CCSER2-202ENST00000359979 NSUN5P1Q3KNT7 163 aa16.64■□□□□ 0.25
CCSER2-202ENST00000359979 ZNF843Q8N446 348 aa16.64■□□□□ 0.25
CCSER2-202ENST00000359979 MRPL16Q9NX20 251 aaKnown RBP16.64■□□□□ 0.25
CCSER2-202ENST00000359979 A0A0J9YY99 117 aa16.63■□□□□ 0.25
CCSER2-202ENST00000359979 IGHV1OR15-1A0A075B7D0 117 aa16.63■□□□□ 0.25
CCSER2-202ENST00000359979 FAM74A4Q5TZK3 123 aa16.63■□□□□ 0.25
CCSER2-202ENST00000359979 Q8N1Y9 231 aa16.63■□□□□ 0.25
CCSER2-202ENST00000359979 MDFICQ9P1T7 246 aa16.63■□□□□ 0.25
CCSER2-202ENST00000359979 TRPT1Q86TN4 253 aaKnown RBP16.62■□□□□ 0.25
CCSER2-202ENST00000359979 RNF152Q8N8N0 203 aa16.62■□□□□ 0.25
CCSER2-202ENST00000359979 IGHV4-59P01825 116 aa16.61■□□□□ 0.25
CCSER2-202ENST00000359979 EMP1P54849 157 aa16.61■□□□□ 0.25
CCSER2-202ENST00000359979 ZNF56Q15929 161 aa16.61■□□□□ 0.25
CCSER2-202ENST00000359979 NFE4Q86UQ8 179 aa16.61■□□□□ 0.25
CCSER2-202ENST00000359979 ZNRF2Q8NHG8 242 aa16.61■□□□□ 0.25
CCSER2-202ENST00000359979 TRAV12-2A0A075B6T6 113 aa16.6■□□□□ 0.25
CCSER2-202ENST00000359979 DEFB112Q30KQ8 113 aa16.6■□□□□ 0.25
CCSER2-202ENST00000359979 SPTAN1Q13813 2472 aaKnown RBP16.6■□□□□ 0.25
CCSER2-202ENST00000359979 VPS13CQ709C8 3753 aa16.6■□□□□ 0.25
CCSER2-202ENST00000359979 FLNCQ14315 2725 aa16.6■□□□□ 0.25
CCSER2-202ENST00000359979 ETDBQ3ZM63 59 aa16.6■□□□□ 0.25
CCSER2-202ENST00000359979 TMEM170BQ5T4T1 132 aa16.6■□□□□ 0.25
CCSER2-202ENST00000359979 DLX4Q92988 240 aaPredicted RBP16.6■□□□□ 0.25
CCSER2-202ENST00000359979 SLC25A29Q8N8R3 303 aa16.59■□□□□ 0.25
CCSER2-202ENST00000359979 ZNF256Q9Y2P7 627 aaPredicted RBP16.59■□□□□ 0.25
CCSER2-202ENST00000359979 SH2D6Q7Z4S9 175 aa16.58■□□□□ 0.25
CCSER2-202ENST00000359979 MYO18BQ8IUG5 2567 aa16.58■□□□□ 0.24
CCSER2-202ENST00000359979 TMEM238C9JI98 176 aa16.58■□□□□ 0.24
CCSER2-202ENST00000359979 TSPAN13O95857 204 aa16.58■□□□□ 0.24
CCSER2-202ENST00000359979 IGKV3-20P01619 116 aa16.58■□□□□ 0.24
CCSER2-202ENST00000359979 LYRM7Q5U5X0 104 aa16.58■□□□□ 0.24
CCSER2-202ENST00000359979 C10orf99Q6UWK7 81 aa16.58■□□□□ 0.24
CCSER2-202ENST00000359979 TSPEAR-AS2P59090 65 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 DEFB104AQ8WTQ1 72 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 COL12A1Q99715 3063 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 TRGV11A0A075B6L2 103 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 IGHV3-30P01768 117 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 IGHV3-30-5P0DP03 117 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 UBE2D3P61077 147 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 UBE2D2P62837 147 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 SPINK13Q1W4C9 94 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 NDUFA11Q86Y39 141 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 LINC01356Q8N9X3 169 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 AMELXQ99217 191 aa16.57■□□□□ 0.24
CCSER2-202ENST00000359979 J3QQQ9 107 aa16.56■□□□□ 0.24
CCSER2-202ENST00000359979 SPAG8Q99932 426 aaPredicted RBP16.56■□□□□ 0.24
CCSER2-202ENST00000359979 CELSR1Q9NYQ6 3014 aa16.56■□□□□ 0.24
CCSER2-202ENST00000359979 J3QLI3 93 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 C20orf203Q8NBC4 194 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 SIGMAR1Q99720 223 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 GAGE12HA6NDE8 117 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 I3L3M4 83 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 SCGB1A1P11684 91 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 SYNJ2BPP57105 145 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 CFAP126Q5VTH2 177 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 ATP6V0E2Q8NHE4 81 aa16.55■□□□□ 0.24
CCSER2-202ENST00000359979 SPATA25Q9BR10 227 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms