RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 C9orf139Q6ZV77 190 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 RNF152Q8N8N0 203 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 GTSF1Q8WW33 167 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 USMG5Q96IX5 58 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 PGLYRP4Q96LB8 373 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 TMEM191AQ9H0A3 160 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 OSTCQ9NRP0 149 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 LY96Q9Y6Y9 160 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 A0A1W2PS18 150 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 P01737 135 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 NHLRC4P0CG21 123 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-202ENST00000359366 NTF3P20783 257 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 PSMG4Q5JS54 123 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 GDF5OSQ5U4N7 250 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 GPHB5Q86YW7 130 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 NUP35Q8NFH5 326 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 RHPN1-AS1Q9BWJ2 59 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 MRPL18Q9H0U6 180 aaKnown RBP3.86□□□□□ -1.79
ATXN3-202ENST00000359366 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 RNF114Q9Y508 228 aa3.86□□□□□ -1.79
ATXN3-202ENST00000359366 SMIM27A0A1W2PRY6 76 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 SPRY2O43597 315 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 CSN1S1P47710 185 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 SLURP1P55000 103 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 FOXI1Q12951 378 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 C16orf92Q96LL3 132 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 TMEM70Q9BUB7 260 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 C19orf71A6NCJ1 209 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 NDUFA4O00483 81 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 CRYGDP07320 174 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 EMP1P54849 157 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 GAGE2BQ13066 116 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 PDE6HQ13956 83 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 KIR3DS1Q14943 382 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 GAGE2EQ4V326 116 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 Q6ZSV7 163 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 FOXC2Q99958 501 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 CDIP1Q9H305 208 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 RPP21Q9H633 154 aaKnown RBP3.85□□□□□ -1.79
ATXN3-202ENST00000359366 GAGE2DQ9UEU5 116 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 U3KQE9 123 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 V9GYY9 64 aa3.85□□□□□ -1.79
ATXN3-202ENST00000359366 H3BUA1 57 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 SH2D1AO60880 128 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 COX8AP10176 69 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 HOXD3P31249 432 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-202ENST00000359366 ASIPP42127 132 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 FOXA3P55318 350 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-202ENST00000359366 MEIG1Q5JSS6 88 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 TMEM136Q6ZRR5 245 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 FAM19A5Q7Z5A7 132 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-202ENST00000359366 SPATA12Q7Z6I5 190 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 LYPD1Q8N2G4 141 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 OR10J6PQ8NGY7 276 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 WIPF2Q8TF74 440 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-202ENST00000359366 PRR25Q96S07 402 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 JMJD8Q96S16 334 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 MCRIP2Q9BUT9 160 aaKnown RBP3.84□□□□□ -1.79
ATXN3-202ENST00000359366 AGPAT4-IT1Q9H0P7 198 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 MDFICQ9P1T7 246 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
ATXN3-202ENST00000359366 NBEAL2Q6ZNJ1 2754 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 IGHV7-4-1A0A0J9YVY3 117 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 OR4C46A6NHA9 309 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 C9JAW5 83 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 H3BMG7 143 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 SYS1-DBNDD2H3BUS1 97 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 APOMO95445 188 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 LY6G6DO95868 133 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 IGKV3-20P01619 116 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 CSN3P07498 182 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 SMIM13P0DJ93 91 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 GCSHP23434 173 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 TSKUQ8WUA8 353 aa3.84□□□□□ -1.8
ATXN3-202ENST00000359366 DAZ1Q9NQZ3 744 aaKnown RBP3.84□□□□□ -1.8
ATXN3-202ENST00000359366 A0A087X0K7 114 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 IZUMO1RA6ND01 250 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 HLA-DQA1P01909 254 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 MT-ATP8P03928 68 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 ARMS2P0C7Q2 107 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 MRPL23Q16540 153 aaKnown RBP3.83□□□□□ -1.8
ATXN3-202ENST00000359366 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 PRR9Q5T870 116 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 FAM231DQ6ZW35 169 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 CCDC179H3BU77 68 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 HSBP1O75506 76 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 LGALS1P09382 135 aaKnown RBP3.83□□□□□ -1.8
ATXN3-202ENST00000359366 OR5AL1P0C617 328 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 ZNF688P0C7X2 276 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 CD28P10747 220 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 MALP21145 153 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 XGP55808 180 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 GAGE13Q4V321 117 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 RASL11AQ6T310 242 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 KLHL30-AS1Q8NEE0 82 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 TMEM101Q96IK0 257 aa3.83□□□□□ -1.8
ATXN3-202ENST00000359366 C11orf21Q9P2W6 132 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms