RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CD5LO43866 347 aa10.8□□□□□ -0.68
SIRPA-202ENST00000358771 MRPL52Q86TS9 123 aaKnown RBP10.8□□□□□ -0.68
SIRPA-202ENST00000358771 PIFOQ8TCI5 191 aa10.8□□□□□ -0.68
SIRPA-202ENST00000358771 TRGV1A0A0A0MS02 117 aa10.79□□□□□ -0.68
SIRPA-202ENST00000358771 CD28P10747 220 aa10.79□□□□□ -0.68
SIRPA-202ENST00000358771 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
SIRPA-202ENST00000358771 PLNP26678 52 aa10.79□□□□□ -0.68
SIRPA-202ENST00000358771 MDFICQ9P1T7 246 aa10.79□□□□□ -0.68
SIRPA-202ENST00000358771 IGSF10Q6WRI0 2623 aa10.79□□□□□ -0.68
SIRPA-202ENST00000358771 IGHV3-38A0A0C4DH36 116 aa10.78□□□□□ -0.68
SIRPA-202ENST00000358771 TMEM238LA0A1B0GVL6 79 aa10.78□□□□□ -0.68
SIRPA-202ENST00000358771 A6NJY4 79 aa10.78□□□□□ -0.68
SIRPA-202ENST00000358771 TEX29Q8N6K0 151 aa10.78□□□□□ -0.68
SIRPA-202ENST00000358771 SCRT2Q9NQ03 307 aa10.78□□□□□ -0.68
SIRPA-202ENST00000358771 Q8N1Y9 231 aa10.78□□□□□ -0.68
SIRPA-202ENST00000358771 K7ERJ3 54 aa10.77□□□□□ -0.68
SIRPA-202ENST00000358771 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.68
SIRPA-202ENST00000358771 J3QR89 54 aa10.77□□□□□ -0.69
SIRPA-202ENST00000358771 ZFAND2AQ8N6M9 145 aa10.77□□□□□ -0.69
SIRPA-202ENST00000358771 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
SIRPA-202ENST00000358771 IGHG4P01861 327 aa10.76□□□□□ -0.69
SIRPA-202ENST00000358771 GPHB5Q86YW7 130 aa10.76□□□□□ -0.69
SIRPA-202ENST00000358771 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
SIRPA-202ENST00000358771 F8VRH5 84 aa10.76□□□□□ -0.69
SIRPA-202ENST00000358771 RPL39P62891 51 aaKnown RBP10.76□□□□□ -0.69
SIRPA-202ENST00000358771 FLNAP21333 2647 aaKnown RBP10.76□□□□□ -0.69
SIRPA-202ENST00000358771 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
SIRPA-202ENST00000358771 PAPPA-AS1Q5QFB9 102 aa10.76□□□□□ -0.69
SIRPA-202ENST00000358771 CFHR3Q02985 330 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 MTURNQ8N3F0 131 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 WFDC11Q8NEX6 87 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 TMEM61Q8N0U2 210 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 TRAV2A0A0B4J234 112 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 ZNF843Q8N446 348 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 GATD1Q8NB37 220 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 BBC3Q96PG8 261 aaPredicted RBP10.75□□□□□ -0.69
SIRPA-202ENST00000358771 SUMO4Q6EEV6 95 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 ZNF479Q96JC4 524 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 PRADC1Q9BSG0 188 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 SPXQ9BT56 116 aa10.75□□□□□ -0.69
SIRPA-202ENST00000358771 UBE2L6O14933 153 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 CCL25O15444 150 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 NPC2P61916 151 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 ZNF415Q09FC8 603 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 SMG1Q96Q15 3661 aaKnown RBP10.74□□□□□ -0.69
SIRPA-202ENST00000358771 GAGE12BA1L429 117 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 COTL1Q14019 142 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 ODF1Q14990 250 aa10.74□□□□□ -0.69
SIRPA-202ENST00000358771 A0A087WX48 190 aa10.73□□□□□ -0.69
SIRPA-202ENST00000358771 PRM2P04554 102 aa10.73□□□□□ -0.69
SIRPA-202ENST00000358771 K7EMT4 169 aa10.73□□□□□ -0.69
SIRPA-202ENST00000358771 K7EP13 123 aa10.73□□□□□ -0.69
SIRPA-202ENST00000358771 IGHV4-31P0DP07 118 aa10.73□□□□□ -0.69
SIRPA-202ENST00000358771 PCP4P48539 62 aa10.73□□□□□ -0.69
SIRPA-202ENST00000358771 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
SIRPA-202ENST00000358771 INSP01308 110 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 USP24Q9UPU5 2620 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 TRPT1Q86TN4 253 aaKnown RBP10.72□□□□□ -0.69
SIRPA-202ENST00000358771 A0A0J9YX75 114 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 HLA-DRB4P13762 266 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 DEFB125Q8N687 156 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 ITPR3Q14573 2671 aa10.72□□□□□ -0.69
SIRPA-202ENST00000358771 TOMM7Q9P0U1 55 aa10.71□□□□□ -0.69
SIRPA-202ENST00000358771 CRXO43186 299 aaPredicted RBP10.71□□□□□ -0.7
SIRPA-202ENST00000358771 PSMB8P28062 276 aa10.71□□□□□ -0.7
SIRPA-202ENST00000358771 RASL10AQ92737 203 aa10.71□□□□□ -0.7
SIRPA-202ENST00000358771 PMVKQ15126 192 aa10.7□□□□□ -0.7
SIRPA-202ENST00000358771 DLX4Q92988 240 aaPredicted RBP10.7□□□□□ -0.7
SIRPA-202ENST00000358771 U3KQE9 123 aa10.7□□□□□ -0.7
SIRPA-202ENST00000358771 IGKV2D-26A0A0A0MRZ7 120 aa10.7□□□□□ -0.7
SIRPA-202ENST00000358771 MEIG1Q5JSS6 88 aa10.7□□□□□ -0.7
SIRPA-202ENST00000358771 OPRPNQ99935 248 aaPredicted RBP10.7□□□□□ -0.7
SIRPA-202ENST00000358771 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 ADARB2-AS1A8MUL3 147 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 TMEM262E9PQX1 116 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 C19orf54Q5BKX5 351 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 TRGV4A0A0C4DH28 118 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 LYRM7Q5U5X0 104 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 CCL24O00175 119 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 TAX1BP3O14907 124 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 FXYD2P54710 66 aa10.69□□□□□ -0.7
SIRPA-202ENST00000358771 J3QKU1 62 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 IGLV1-40P01703 118 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 AMTNQ6UX39 209 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 I3L3M4 83 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 P0DMU3 169 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 SRSF2Q01130 221 aaKnown RBP10.68□□□□□ -0.7
SIRPA-202ENST00000358771 Q6YL49 198 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 BOD1L2Q8IYS8 172 aa10.68□□□□□ -0.7
SIRPA-202ENST00000358771 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
SIRPA-202ENST00000358771 U3KQK5 164 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms