RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 OVOL1O14753 267 aa9.08□□□□□ -0.96
SMARCAL1-201ENST00000357276 ELANEP08246 267 aa9.08□□□□□ -0.96
SMARCAL1-201ENST00000357276 S100A4P26447 101 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-201ENST00000357276 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-201ENST00000357276 ECSCRQ19T08 205 aa9.08□□□□□ -0.96
SMARCAL1-201ENST00000357276 PTPRQQ9UMZ3 2332 aa9.08□□□□□ -0.96
SMARCAL1-201ENST00000357276 A0A0J9YX75 114 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 FBXL19-AS1Q494R0 122 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 TRBV27A0A0K0K1C4 114 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 LEPROTO15243 131 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 GNRH2O43555 120 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 RAX2Q96IS3 184 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 TRBV6-5A0A0K0K1A5 114 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 VCYO14598 125 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 SNCGO76070 127 aa9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 PRR30Q53SZ7 412 aaPredicted RBP9.07□□□□□ -0.96
SMARCAL1-201ENST00000357276 ACACAQ13085 2346 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 GAGE12JA6NER3 117 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 GAGE7O76087 117 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 GAGE12FP0CL80 117 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 GAGE12GP0CL81 117 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 GAGE12IP0CL82 117 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 GAGE4Q13068 117 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 TMEM170BQ5T4T1 132 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 G3V318 75 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 IGHV1-69P01742 117 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 C19orf54Q5BKX5 351 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 NTN5Q8WTR8 489 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 TRBV30A0A0K0K1B3 111 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 CCDC179H3BU77 68 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 LY6HO94772 140 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 IFITM1P13164 125 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 ATXN8Q156A1 80 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 OR10J6PQ8NGY7 276 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 FAM110AQ9BQ89 295 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 SIRPDQ9H106 197 aa9.06□□□□□ -0.96
SMARCAL1-201ENST00000357276 M0R2P5 195 aa9.05□□□□□ -0.96
SMARCAL1-201ENST00000357276 LGALS3P17931 250 aaKnown RBP9.05□□□□□ -0.96
SMARCAL1-201ENST00000357276 POLEQ07864 2286 aa9.05□□□□□ -0.96
SMARCAL1-201ENST00000357276 ANKRD11Q6UB99 2663 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-201ENST00000357276 TRBV10-2A0A0K0K1G8 114 aa9.05□□□□□ -0.96
SMARCAL1-201ENST00000357276 MUSTN1Q8IVN3 82 aa9.05□□□□□ -0.96
SMARCAL1-201ENST00000357276 PCNX1Q96RV3 2341 aa9.05□□□□□ -0.96
SMARCAL1-201ENST00000357276 SDHAF1A6NFY7 115 aa9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 J3KRW8 73 aa9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 LGALS9O00182 355 aa9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 LRBAP50851 2863 aa9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 NSUN5P1Q3KNT7 163 aa9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 TEX49A0A1B0GTD5 131 aa9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 RNASE4P34096 147 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 SPANXA1Q9NS26 97 aa9.04□□□□□ -0.96
SMARCAL1-201ENST00000357276 MRPL23Q16540 153 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 LITAFQ99732 161 aa9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 WNK2Q9Y3S1 2297 aa9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 KLLNB2CW77 178 aa9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 ZFP36P26651 326 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 ARL3P36405 182 aa9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 DEFB1P60022 68 aa9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 LINC01560Q8TB33 94 aa9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 ATMQ13315 3056 aa9.03□□□□□ -0.96
SMARCAL1-201ENST00000357276 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.96
SMARCAL1-201ENST00000357276 DEFB121Q5J5C9 76 aa9.02□□□□□ -0.96
SMARCAL1-201ENST00000357276 JPT2Q9H910 190 aa9.02□□□□□ -0.97
SMARCAL1-201ENST00000357276 MDFICQ9P1T7 246 aa9.02□□□□□ -0.97
SMARCAL1-201ENST00000357276 TRIAP1O43715 76 aa9.02□□□□□ -0.97
SMARCAL1-201ENST00000357276 RHOHQ15669 191 aa9.02□□□□□ -0.97
SMARCAL1-201ENST00000357276 TTC32Q5I0X7 151 aa9.02□□□□□ -0.97
SMARCAL1-201ENST00000357276 C11orf71Q6IPW1 123 aa9.02□□□□□ -0.97
SMARCAL1-201ENST00000357276 UNQ9165/PRO28630Q6UXU0 137 aa9.02□□□□□ -0.97
SMARCAL1-201ENST00000357276 TRAV8-4A0A0B4J246 113 aa9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 FAM223BA6NKX1 122 aa9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 FAM223AQ8IWN6 122 aa9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 TPRP12270 2363 aaKnown RBP9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 TRAV2A0A0B4J234 112 aa9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 FAM240AA0A1B0GVK7 77 aa9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 UBE2E1P51965 193 aa9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 C15orf53Q8NAA6 179 aa9.01□□□□□ -0.97
SMARCAL1-201ENST00000357276 A0A0J9YXY3 114 aa9□□□□□ -0.97
SMARCAL1-201ENST00000357276 C5orf56Q8N8D9 126 aa9□□□□□ -0.97
SMARCAL1-201ENST00000357276 H3BMM0 161 aa9□□□□□ -0.97
SMARCAL1-201ENST00000357276 NDUFA4O00483 81 aa9□□□□□ -0.97
SMARCAL1-201ENST00000357276 UBE2WQ96B02 151 aa9□□□□□ -0.97
SMARCAL1-201ENST00000357276 F6UB75 175 aa9□□□□□ -0.97
SMARCAL1-201ENST00000357276 H7C423 109 aa8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 M0QY20 66 aa8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 OPRPNQ99935 248 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 H3BT86 120 aa8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 FAM159AQ6UWV7 190 aa8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 DEFB104AQ8WTQ1 72 aa8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 C9orf85Q96MD7 179 aa8.99□□□□□ -0.97
SMARCAL1-201ENST00000357276 ABCA4P78363 2273 aa8.98□□□□□ -0.97
SMARCAL1-201ENST00000357276 A0A087WWL8 130 aa8.98□□□□□ -0.97
SMARCAL1-201ENST00000357276 H7C2G1 150 aa8.98□□□□□ -0.97
SMARCAL1-201ENST00000357276 IGHV4-39P01824 125 aa8.98□□□□□ -0.97
SMARCAL1-201ENST00000357276 GRNP28799 593 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms