RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 ZNF575Q86XF7 245 aa13.93□□□□□ -0.18
CHRD-203ENST00000356534 SSBP4Q9BWG4 385 aaPredicted RBP13.93□□□□□ -0.18
CHRD-203ENST00000356534 RAB19A4D1S5 217 aa13.92□□□□□ -0.18
CHRD-203ENST00000356534 P01737 135 aa13.92□□□□□ -0.18
CHRD-203ENST00000356534 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
CHRD-203ENST00000356534 NFE4Q86UQ8 179 aa13.92□□□□□ -0.18
CHRD-203ENST00000356534 WFDC10BQ8IUB3 73 aa13.92□□□□□ -0.18
CHRD-203ENST00000356534 SAMD10Q9BYL1 202 aa13.92□□□□□ -0.18
CHRD-203ENST00000356534 GTSF1LQ9H1H1 148 aa13.92□□□□□ -0.18
CHRD-203ENST00000356534 C19orf71A6NCJ1 209 aa13.91□□□□□ -0.18
CHRD-203ENST00000356534 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
CHRD-203ENST00000356534 NDUFS6O75380 124 aaKnown RBP13.91□□□□□ -0.18
CHRD-203ENST00000356534 LELP1Q5T871 98 aa13.91□□□□□ -0.18
CHRD-203ENST00000356534 OR2D3Q8NGH3 330 aa13.91□□□□□ -0.18
CHRD-203ENST00000356534 OR10AG1Q8NH19 301 aa13.91□□□□□ -0.18
CHRD-203ENST00000356534 FAT2Q9NYQ8 4349 aa13.91□□□□□ -0.18
CHRD-203ENST00000356534 TRBV20OR9-2A0A075B6H5 130 aa13.9□□□□□ -0.18
CHRD-203ENST00000356534 A0A087WWL8 130 aa13.9□□□□□ -0.18
CHRD-203ENST00000356534 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.18
CHRD-203ENST00000356534 CRYGDP07320 174 aa13.9□□□□□ -0.18
CHRD-203ENST00000356534 LINC00315P59091 139 aa13.9□□□□□ -0.18
CHRD-203ENST00000356534 OR10J3Q5JRS4 329 aa13.9□□□□□ -0.18
CHRD-203ENST00000356534 IGHV3-38A0A0C4DH36 116 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 GAGE12JA6NER3 117 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 LINC00694P0DN24 101 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 GAGE1Q13065 139 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 GAGE4Q13068 117 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 GAGE5Q13069 117 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 GAGE13Q4V321 117 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 FER1L6-AS1Q8NA97 138 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 AP1S3Q96PC3 154 aa13.89□□□□□ -0.19
CHRD-203ENST00000356534 A0A087WWC5 75 aa13.88□□□□□ -0.19
CHRD-203ENST00000356534 SMIM17P0DL12 118 aa13.88□□□□□ -0.19
CHRD-203ENST00000356534 RAB4BP61018 213 aa13.88□□□□□ -0.19
CHRD-203ENST00000356534 TNP2Q05952 138 aa13.88□□□□□ -0.19
CHRD-203ENST00000356534 ZNF56Q15929 161 aa13.88□□□□□ -0.19
CHRD-203ENST00000356534 Q6ZSN1 163 aa13.88□□□□□ -0.19
CHRD-203ENST00000356534 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
CHRD-203ENST00000356534 CACNG7P62955 275 aa13.87□□□□□ -0.19
CHRD-203ENST00000356534 RPL36AP83881 106 aaKnown RBP13.87□□□□□ -0.19
CHRD-203ENST00000356534 LINC01556Q5JQF7 62 aa13.87□□□□□ -0.19
CHRD-203ENST00000356534 RPL36ALQ969Q0 106 aaKnown RBP13.87□□□□□ -0.19
CHRD-203ENST00000356534 EIF5A2Q9GZV4 153 aaKnown RBP13.87□□□□□ -0.19
CHRD-203ENST00000356534 F2Z2F3 143 aa13.86□□□□□ -0.19
CHRD-203ENST00000356534 IGLC6P0CF74 106 aa13.86□□□□□ -0.19
CHRD-203ENST00000356534 TOR2AQ5JU69 321 aa13.86□□□□□ -0.19
CHRD-203ENST00000356534 KRTAP17-1Q9BYP8 105 aa13.86□□□□□ -0.19
CHRD-203ENST00000356534 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.85□□□□□ -0.19
CHRD-203ENST00000356534 FAM210AQ96ND0 272 aa13.85□□□□□ -0.19
CHRD-203ENST00000356534 TPPP3Q9BW30 176 aa13.85□□□□□ -0.19
CHRD-203ENST00000356534 MSRB1Q9NZV6 116 aa13.85□□□□□ -0.19
CHRD-203ENST00000356534 TRBV7-3A0A075B6L6 115 aa13.83□□□□□ -0.2
CHRD-203ENST00000356534 TRGC1P0CF51 173 aa13.83□□□□□ -0.2
CHRD-203ENST00000356534 EREGO14944 169 aa13.82□□□□□ -0.2
CHRD-203ENST00000356534 GZMBP10144 247 aa13.82□□□□□ -0.2
CHRD-203ENST00000356534 Q6ZRN7 208 aaPredicted RBP13.82□□□□□ -0.2
CHRD-203ENST00000356534 NUDT10Q8NFP7 164 aa13.82□□□□□ -0.2
CHRD-203ENST00000356534 OR10G8Q8NGN5 311 aa13.82□□□□□ -0.2
CHRD-203ENST00000356534 OCC1Q8TAD7 63 aa13.82□□□□□ -0.2
CHRD-203ENST00000356534 NUDT11Q96G61 164 aa13.82□□□□□ -0.2
CHRD-203ENST00000356534 RPP21Q9H633 154 aaKnown RBP13.82□□□□□ -0.2
CHRD-203ENST00000356534 PKHD1P08F94 4074 aa13.82□□□□□ -0.2
CHRD-203ENST00000356534 MUC21A0A0G2JKD1 596 aa13.81□□□□□ -0.2
CHRD-203ENST00000356534 MUC21A0A140T8X8 626 aa13.81□□□□□ -0.2
CHRD-203ENST00000356534 F5H697 171 aa13.81□□□□□ -0.2
CHRD-203ENST00000356534 CEBPGP53567 150 aa13.81□□□□□ -0.2
CHRD-203ENST00000356534 ERVFC1-1P60608 527 aa13.81□□□□□ -0.2
CHRD-203ENST00000356534 WDR73Q6P4I2 378 aa13.81□□□□□ -0.2
CHRD-203ENST00000356534 H7C1H1 209 aa13.8□□□□□ -0.2
CHRD-203ENST00000356534 K7EN84 100 aa13.8□□□□□ -0.2
CHRD-203ENST00000356534 LAGE3Q14657 143 aa13.8□□□□□ -0.2
CHRD-203ENST00000356534 SMIM7Q9BQ49 75 aa13.8□□□□□ -0.2
CHRD-203ENST00000356534 CTRLP40313 264 aa13.79□□□□□ -0.2
CHRD-203ENST00000356534 UBE2D3P61077 147 aa13.79□□□□□ -0.2
CHRD-203ENST00000356534 SSTP61278 116 aa13.79□□□□□ -0.2
CHRD-203ENST00000356534 UBE2D2P62837 147 aa13.79□□□□□ -0.2
CHRD-203ENST00000356534 TEX261Q6UWH6 196 aa13.79□□□□□ -0.2
CHRD-203ENST00000356534 FAM231DQ6ZW35 169 aa13.79□□□□□ -0.2
CHRD-203ENST00000356534 RNASE7Q9H1E1 156 aaKnown RBP13.79□□□□□ -0.2
CHRD-203ENST00000356534 PKD1P98161 4303 aa13.79□□□□□ -0.2
CHRD-203ENST00000356534 IBA57-AS1B1ANH7 110 aa13.78□□□□□ -0.2
CHRD-203ENST00000356534 TMEM97Q5BJF2 176 aa13.78□□□□□ -0.2
CHRD-203ENST00000356534 LYZL1Q6UWQ5 148 aa13.78□□□□□ -0.2
CHRD-203ENST00000356534 KIF25-AS1Q9Y6Z4 181 aa13.78□□□□□ -0.2
CHRD-203ENST00000356534 URGCP-MRPS24S4R325 110 aa13.78□□□□□ -0.2
CHRD-203ENST00000356534 GATCO43716 136 aaKnown RBP13.77□□□□□ -0.21
CHRD-203ENST00000356534 CT83Q5H943 113 aa13.77□□□□□ -0.21
CHRD-203ENST00000356534 NEXN-AS1Q8NBZ9 246 aa13.77□□□□□ -0.21
CHRD-203ENST00000356534 CHCHD7Q9BUK0 85 aa13.77□□□□□ -0.21
CHRD-203ENST00000356534 CNFNQ9BYD5 112 aa13.77□□□□□ -0.21
CHRD-203ENST00000356534 Q9UF83 564 aa13.77□□□□□ -0.21
CHRD-203ENST00000356534 ZNF727A8MUV8 499 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 A8MWL6 223 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 C16orf90A8MZG2 172 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 IGHV3-30P01768 117 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 IGHV3-33P01772 117 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 MGPP08493 103 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 IGHV3-30-3P0DP02 117 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 IGHV3-30-5P0DP03 117 aa13.76□□□□□ -0.21
CHRD-203ENST00000356534 KCNIP4Q6PIL6 250 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms