RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 USP9XQ93008 2570 aaPredicted RBP10.09□□□□□ -0.79
NCDN-201ENST00000356090 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
NCDN-201ENST00000356090 PTPN13Q12923 2485 aa10.09□□□□□ -0.79
NCDN-201ENST00000356090 PRSS2P07478 247 aa10.09□□□□□ -0.79
NCDN-201ENST00000356090 POLQO75417 2590 aa10.09□□□□□ -0.79
NCDN-201ENST00000356090 IGHV3-73A0A0B4J1V6 119 aa10.09□□□□□ -0.79
NCDN-201ENST00000356090 LINC01546A6NGU7 62 aa10.09□□□□□ -0.79
NCDN-201ENST00000356090 KLRB1Q12918 225 aa10.09□□□□□ -0.79
NCDN-201ENST00000356090 TSPAN13O95857 204 aa10.08□□□□□ -0.8
NCDN-201ENST00000356090 MRPL53Q96EL3 112 aaKnown RBP10.08□□□□□ -0.8
NCDN-201ENST00000356090 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
NCDN-201ENST00000356090 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
NCDN-201ENST00000356090 SPINK8P0C7L1 97 aa10.08□□□□□ -0.8
NCDN-201ENST00000356090 ADARB2-AS1A8MUL3 147 aa10.08□□□□□ -0.8
NCDN-201ENST00000356090 Q6ZS46 218 aa10.08□□□□□ -0.8
NCDN-201ENST00000356090 FBXL19-AS1Q494R0 122 aa10.07□□□□□ -0.8
NCDN-201ENST00000356090 SUMO4Q6EEV6 95 aa10.07□□□□□ -0.8
NCDN-201ENST00000356090 RNASE3P12724 160 aaKnown RBP10.07□□□□□ -0.8
NCDN-201ENST00000356090 PMVKQ15126 192 aa10.07□□□□□ -0.8
NCDN-201ENST00000356090 NPC2P61916 151 aa10.07□□□□□ -0.8
NCDN-201ENST00000356090 FOXI1Q12951 378 aa10.07□□□□□ -0.8
NCDN-201ENST00000356090 LYRM7Q5U5X0 104 aa10.07□□□□□ -0.8
NCDN-201ENST00000356090 DUX5Q96PT3 197 aa10.07□□□□□ -0.8
NCDN-201ENST00000356090 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 LMO4P61968 165 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 MUC4Q99102 2169 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 CENPEQ02224 2701 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 PPP1R17O96001 155 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 IGHV4-38-2P0DP08 117 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
NCDN-201ENST00000356090 IGHV4-4A0A075B6R2 117 aa10.05□□□□□ -0.8
NCDN-201ENST00000356090 VCYO14598 125 aa10.05□□□□□ -0.8
NCDN-201ENST00000356090 RNASE13Q5GAN3 156 aaKnown RBP10.05□□□□□ -0.8
NCDN-201ENST00000356090 NDUFA4O00483 81 aa10.05□□□□□ -0.8
NCDN-201ENST00000356090 IGHV4-39P01824 125 aa10.05□□□□□ -0.8
NCDN-201ENST00000356090 C1QTNF4Q9BXJ3 329 aa10.05□□□□□ -0.8
NCDN-201ENST00000356090 SPINK13Q1W4C9 94 aa10.05□□□□□ -0.8
NCDN-201ENST00000356090 ITLN2Q8WWU7 325 aaPredicted RBP10.05□□□□□ -0.8
NCDN-201ENST00000356090 A8MWV9 139 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 C9JAW5 83 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 ID1P41134 155 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 U3KQE9 123 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 J3QQQ9 107 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 TCL1BO95988 128 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 AJUBAQ96IF1 538 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 MT-ATP8P03928 68 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 GEMIN7Q9H840 131 aaKnown RBP10.04□□□□□ -0.8
NCDN-201ENST00000356090 DAZ1Q9NQZ3 744 aaKnown RBP10.04□□□□□ -0.8
NCDN-201ENST00000356090 MDFICQ9P1T7 246 aa10.04□□□□□ -0.8
NCDN-201ENST00000356090 A0A0J9YY99 117 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 NFE4Q86UQ8 179 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 SPXQ9BT56 116 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 IGHV1-69DA0A0B4J2H0 117 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 IGHV1-69P01742 117 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 CRYGDP07320 174 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 PRO0461Q9UI25 63 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
NCDN-201ENST00000356090 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
NCDN-201ENST00000356090 ZNF876PQ49A33 203 aa10.02□□□□□ -0.81
NCDN-201ENST00000356090 A4D1N5 150 aa10.02□□□□□ -0.81
NCDN-201ENST00000356090 KNCNA6PVL3 124 aa10.02□□□□□ -0.81
NCDN-201ENST00000356090 TSHBP01222 138 aa10.02□□□□□ -0.81
NCDN-201ENST00000356090 TRPT1Q86TN4 253 aaKnown RBP10.01□□□□□ -0.81
NCDN-201ENST00000356090 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 VCX2Q9H322 139 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 PRO1854Q9UHT4 67 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 SONP18583 2426 aaKnown RBP10.01□□□□□ -0.81
NCDN-201ENST00000356090 IGHV4-61A0A0C4DH41 118 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 ZNRF2Q8NHG8 242 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 CFC1BP0CG36 223 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 CFC1P0CG37 223 aa10.01□□□□□ -0.81
NCDN-201ENST00000356090 C10orf99Q6UWK7 81 aa10□□□□□ -0.81
NCDN-201ENST00000356090 ANKRD29Q8N6D5 301 aa10□□□□□ -0.81
NCDN-201ENST00000356090 PPDPFLQ8WWR9 84 aa10□□□□□ -0.81
NCDN-201ENST00000356090 ERG28Q9UKR5 140 aa10□□□□□ -0.81
NCDN-201ENST00000356090 C10orf126Q8N4M7 172 aa10□□□□□ -0.81
NCDN-201ENST00000356090 SMIM20Q8N5G0 67 aa10□□□□□ -0.81
NCDN-201ENST00000356090 CEMP1Q6PRD7 247 aaPredicted RBP9.99□□□□□ -0.81
NCDN-201ENST00000356090 ZNF580Q9UK33 172 aa9.99□□□□□ -0.81
NCDN-201ENST00000356090 ABCA2Q9BZC7 2435 aa9.99□□□□□ -0.81
NCDN-201ENST00000356090 RNF223E7ERA6 249 aa9.99□□□□□ -0.81
NCDN-201ENST00000356090 UBE2D1P51668 147 aa9.99□□□□□ -0.81
NCDN-201ENST00000356090 ATP5J2P56134 94 aa9.99□□□□□ -0.81
NCDN-201ENST00000356090 Q8N1Y9 231 aa9.99□□□□□ -0.81
NCDN-201ENST00000356090 USMG5Q96IX5 58 aa9.99□□□□□ -0.81
NCDN-201ENST00000356090 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
NCDN-201ENST00000356090 C19orf84I3L1E1 186 aa9.98□□□□□ -0.81
NCDN-201ENST00000356090 XGP55808 180 aa9.98□□□□□ -0.81
NCDN-201ENST00000356090 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
NCDN-201ENST00000356090 TEN1Q86WV5 123 aa9.98□□□□□ -0.81
NCDN-201ENST00000356090 IGIPA6NJ69 53 aa9.98□□□□□ -0.81
NCDN-201ENST00000356090 CD28P10747 220 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms