RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 COX7A2LO14548 114 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 NDUFC2O95298 119 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 PRB4P10163 310 aaPredicted RBP5.76□□□□□ -1.49
CCR9-201ENST00000355983 LINC00315P59091 139 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 TRAV13-1A0A0B4J241 112 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 M0R1B8 84 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 RNASE4P34096 147 aaKnown RBP5.76□□□□□ -1.49
CCR9-201ENST00000355983 LINC00477Q96M19 166 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 JPT2Q9H910 190 aa5.76□□□□□ -1.49
CCR9-201ENST00000355983 OXTP01178 125 aa5.75□□□□□ -1.49
CCR9-201ENST00000355983 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
CCR9-201ENST00000355983 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
CCR9-201ENST00000355983 PHLDA3Q9Y5J5 127 aa5.75□□□□□ -1.49
CCR9-201ENST00000355983 BEAN1Q3B7T3 259 aa5.75□□□□□ -1.49
CCR9-201ENST00000355983 IGFL4Q6B9Z1 124 aa5.75□□□□□ -1.49
CCR9-201ENST00000355983 PRSS33Q8NF86 280 aa5.75□□□□□ -1.49
CCR9-201ENST00000355983 TRAV8-3A0A0A6YYJ7 113 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 IGHV3-30-3P0DP02 117 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 PMS2CLQ68D20 193 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 RNF182Q8N6D2 247 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 COPS9Q8WXC6 57 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 FAM19A4Q96LR4 140 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 PRO3102Q9H379 93 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 CDH23Q9H251 3354 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 MGPP08493 103 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 RPL39P62891 51 aaKnown RBP5.74□□□□□ -1.49
CCR9-201ENST00000355983 HRCT1Q6UXD1 115 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 U3KQE9 123 aa5.74□□□□□ -1.49
CCR9-201ENST00000355983 IGHV3OR16-10A0A075B7F0 116 aa5.73□□□□□ -1.49
CCR9-201ENST00000355983 IGHV1-58A0A0C4DH39 117 aa5.73□□□□□ -1.49
CCR9-201ENST00000355983 MBD3L4A6NDZ8 208 aaPredicted RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 MBD3L3A6NE82 208 aaPredicted RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 MBD3L5A6NJ08 208 aaPredicted RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 S100A4P26447 101 aaKnown RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 MRPS36P82909 103 aaKnown RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 C9orf139Q6ZV77 190 aa5.73□□□□□ -1.49
CCR9-201ENST00000355983 ZFAND2AQ8N6M9 145 aa5.73□□□□□ -1.49
CCR9-201ENST00000355983 MBD3L2Q8NHZ7 208 aaPredicted RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 ITLN2Q8WWU7 325 aaPredicted RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 EEF1AKMT3Q96AZ1 226 aa5.73□□□□□ -1.49
CCR9-201ENST00000355983 PRORYQ9H606 182 aa5.73□□□□□ -1.49
CCR9-201ENST00000355983 TRAV41A0A0B4J266 112 aa5.73□□□□□ -1.49
CCR9-201ENST00000355983 DAZ2Q13117 558 aaKnown RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 DAZ4Q86SG3 579 aaKnown RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 DAZ1Q9NQZ3 744 aaKnown RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 DAZ3Q9NR90 486 aaKnown RBP5.73□□□□□ -1.49
CCR9-201ENST00000355983 BCE1O60756 84 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 TIRAPP58753 221 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 PRR9Q5T870 116 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 CYSTM1Q9H1C7 97 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 RNASE3P12724 160 aaKnown RBP5.72□□□□□ -1.49
CCR9-201ENST00000355983 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 LYPD2Q6UXB3 125 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 C20orf203Q8NBC4 194 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 OVOL2Q9BRP0 275 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 C22orf24Q9Y442 160 aa5.72□□□□□ -1.49
CCR9-201ENST00000355983 KIAA0100Q14667 2235 aaKnown RBP5.72□□□□□ -1.49
CCR9-201ENST00000355983 CLPSL1A2RUU4 121 aa5.71□□□□□ -1.49
CCR9-201ENST00000355983 SPRY2O43597 315 aa5.71□□□□□ -1.49
CCR9-201ENST00000355983 ADAMTSL4-AS1Q5T5F5 129 aa5.71□□□□□ -1.49
CCR9-201ENST00000355983 PRIMA1Q86XR5 153 aa5.71□□□□□ -1.49
CCR9-201ENST00000355983 REV3LO60673 3130 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 ABCA1O95477 2261 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 ZGRF1Q86YA3 2104 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 IGLV4-3A0A075B6K6 122 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 PRSS2P07478 247 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 BAALC-AS2P0C853 105 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 DSCR8Q96T75 97 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 SERP1Q9Y6X1 66 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 FAM186AA6NE01 2351 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 TRAV12-2A0A075B6T6 113 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 TINCRA0A1B0GVN0 87 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 PF4P02776 101 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 SYNJ2BPP57105 145 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 VSIG2Q96IQ7 327 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 OBSCN-AS1Q96MR7 158 aa5.71□□□□□ -1.5
CCR9-201ENST00000355983 A0A0J9YXV3 536 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 J3QLI3 93 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 SEC61GP60059 68 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 PRRC2AP48634 2157 aaKnown RBP5.7□□□□□ -1.5
CCR9-201ENST00000355983 NDUFA1O15239 70 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 PFN2P35080 140 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 NPC2P61916 151 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 ATP5EP2Q5VTU8 51 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 C9orf85Q96MD7 179 aa5.7□□□□□ -1.5
CCR9-201ENST00000355983 USP17L23D6RBM5 183 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 FAM110DQ8TAY7 271 aaPredicted RBP5.69□□□□□ -1.5
CCR9-201ENST00000355983 S4R3C0 116 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 VCANP13611 3396 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 CIRBPQ14011 172 aaKnown RBP5.69□□□□□ -1.5
CCR9-201ENST00000355983 VMO1Q7Z5L0 202 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 Q8N6K4 173 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 ZNF576Q9H609 170 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 DPM3Q9P2X0 92 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 MED13Q9UHV7 2174 aa5.69□□□□□ -1.5
CCR9-201ENST00000355983 COL6A3P12111 3177 aa5.68□□□□□ -1.5
CCR9-201ENST00000355983 LY6G5BQ8NDX9 201 aa5.68□□□□□ -1.5
CCR9-201ENST00000355983 IGFL2Q6UWQ7 119 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms