RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 ZNF503Q96F45 646 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 IGKV2D-24A0A075B6R9 120 aa12.56□□□□□ -0.4
SHTN1-202ENST00000355371 PRO3102Q9H379 93 aa12.56□□□□□ -0.4
SHTN1-202ENST00000355371 ZFHX2Q9C0A1 2572 aaPredicted RBP12.56□□□□□ -0.4
SHTN1-202ENST00000355371 IGHG4P01861 327 aa12.56□□□□□ -0.4
SHTN1-202ENST00000355371 TIMM17AQ99595 171 aa12.56□□□□□ -0.4
SHTN1-202ENST00000355371 TECTAO75443 2155 aa12.56□□□□□ -0.4
SHTN1-202ENST00000355371 A0A0J9YXV3 536 aa12.55□□□□□ -0.4
SHTN1-202ENST00000355371 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
SHTN1-202ENST00000355371 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
SHTN1-202ENST00000355371 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
SHTN1-202ENST00000355371 AMTNQ6UX39 209 aa12.55□□□□□ -0.4
SHTN1-202ENST00000355371 KIAA1549LQ6ZVL6 1849 aa12.55□□□□□ -0.4
SHTN1-202ENST00000355371 C1orf43Q9BWL3 253 aa12.55□□□□□ -0.4
SHTN1-202ENST00000355371 PKIGQ9Y2B9 76 aa12.55□□□□□ -0.4
SHTN1-202ENST00000355371 PROP1O75360 226 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 BRWD1-AS2P59051 145 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 Q6ZPA2 131 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 TRBV7-3A0A075B6L6 115 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 LMO4P61968 165 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 C5orf38Q86SI9 138 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 DENND4AQ7Z401 1863 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 HAMPP81172 84 aa12.54□□□□□ -0.4
SHTN1-202ENST00000355371 LOXL1Q08397 574 aaPredicted RBP12.54□□□□□ -0.4
SHTN1-202ENST00000355371 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
SHTN1-202ENST00000355371 GAGE12HA6NDE8 117 aa12.53□□□□□ -0.4
SHTN1-202ENST00000355371 A0A0J9YX75 114 aa12.52□□□□□ -0.4
SHTN1-202ENST00000355371 UNQ9165/PRO28630Q6UXU0 137 aa12.52□□□□□ -0.4
SHTN1-202ENST00000355371 NTN5Q8WTR8 489 aaPredicted RBP12.52□□□□□ -0.4
SHTN1-202ENST00000355371 ORMDL1Q9P0S3 153 aa12.52□□□□□ -0.4
SHTN1-202ENST00000355371 IGLL5B9A064 214 aa12.52□□□□□ -0.4
SHTN1-202ENST00000355371 PRORYQ9H606 182 aa12.52□□□□□ -0.4
SHTN1-202ENST00000355371 COX7A2LO14548 114 aa12.52□□□□□ -0.41
SHTN1-202ENST00000355371 BAALCQ8WXS3 180 aa12.52□□□□□ -0.41
SHTN1-202ENST00000355371 COL4A4P53420 1690 aaPredicted RBP12.52□□□□□ -0.41
SHTN1-202ENST00000355371 EIF4EBP1Q13541 118 aaPredicted RBP12.52□□□□□ -0.41
SHTN1-202ENST00000355371 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
SHTN1-202ENST00000355371 CLPSL1A2RUU4 121 aa12.51□□□□□ -0.41
SHTN1-202ENST00000355371 CCDC140Q96MF4 163 aa12.51□□□□□ -0.41
SHTN1-202ENST00000355371 LRRC75A-AS1Q8N1F1 130 aa12.51□□□□□ -0.41
SHTN1-202ENST00000355371 ADAMTS9Q9P2N4 1935 aa12.51□□□□□ -0.41
SHTN1-202ENST00000355371 BAALC-AS2P0C853 105 aa12.51□□□□□ -0.41
SHTN1-202ENST00000355371 COX7B2Q8TF08 81 aa12.51□□□□□ -0.41
SHTN1-202ENST00000355371 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
SHTN1-202ENST00000355371 H0YGX0 51 aa12.5□□□□□ -0.41
SHTN1-202ENST00000355371 CCL25O15444 150 aa12.5□□□□□ -0.41
SHTN1-202ENST00000355371 TRBV12-3P01733 135 aa12.5□□□□□ -0.41
SHTN1-202ENST00000355371 MUSTN1Q8IVN3 82 aa12.5□□□□□ -0.41
SHTN1-202ENST00000355371 E9PLD3 99 aa12.5□□□□□ -0.41
SHTN1-202ENST00000355371 RPL39P62891 51 aaKnown RBP12.5□□□□□ -0.41
SHTN1-202ENST00000355371 MED13LQ71F56 2210 aa12.49□□□□□ -0.41
SHTN1-202ENST00000355371 ANKRD29Q8N6D5 301 aa12.49□□□□□ -0.41
SHTN1-202ENST00000355371 C11orf86A6NJI1 115 aa12.49□□□□□ -0.41
SHTN1-202ENST00000355371 HHLA3Q9XRX5 114 aa12.49□□□□□ -0.41
SHTN1-202ENST00000355371 IGF1P05019 195 aa12.49□□□□□ -0.41
SHTN1-202ENST00000355371 TDRG1Q3Y452 100 aa12.49□□□□□ -0.41
SHTN1-202ENST00000355371 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
SHTN1-202ENST00000355371 CAMK2N2Q96S95 79 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 A0A1B0GXF2 115 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 ACYP1P07311 99 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 INSL3P51460 131 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 ZNF295-AS1Q8N0V1 137 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 A4D1N5 150 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 TMEM61Q8N0U2 210 aa12.48□□□□□ -0.41
SHTN1-202ENST00000355371 CCL18P55774 89 aa12.47□□□□□ -0.41
SHTN1-202ENST00000355371 MRAPQ8TCY5 172 aa12.47□□□□□ -0.41
SHTN1-202ENST00000355371 TINCRA0A1B0GVN0 87 aa12.47□□□□□ -0.41
SHTN1-202ENST00000355371 TMEM263Q8WUH6 116 aaKnown RBP12.47□□□□□ -0.41
SHTN1-202ENST00000355371 Q9HAA7 133 aa12.47□□□□□ -0.41
SHTN1-202ENST00000355371 IGLV2-8P01709 118 aa12.46□□□□□ -0.41
SHTN1-202ENST00000355371 CRYGBP07316 175 aa12.46□□□□□ -0.41
SHTN1-202ENST00000355371 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.41
SHTN1-202ENST00000355371 UBE2BP63146 152 aa12.46□□□□□ -0.41
SHTN1-202ENST00000355371 MUC6Q6W4X9 2439 aa12.46□□□□□ -0.41
SHTN1-202ENST00000355371 ODF1Q14990 250 aa12.46□□□□□ -0.42
SHTN1-202ENST00000355371 DEFB1P60022 68 aa12.46□□□□□ -0.42
SHTN1-202ENST00000355371 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.42
SHTN1-202ENST00000355371 FRMD6-AS1P0C7T7 363 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 C1orf229Q6ZS94 237 aaPredicted RBP12.45□□□□□ -0.42
SHTN1-202ENST00000355371 VSIG2Q96IQ7 327 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 CXCL5P42830 114 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 EBI3Q14213 229 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 CITED1Q99966 193 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 C20orf203Q8NBC4 194 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 LGALS9O00182 355 aa12.45□□□□□ -0.42
SHTN1-202ENST00000355371 DNAJC9-AS1A6NH13 148 aa12.44□□□□□ -0.42
SHTN1-202ENST00000355371 C22orf34Q6ZV56 151 aa12.44□□□□□ -0.42
SHTN1-202ENST00000355371 IGLV10-54A0A075B6I4 117 aa12.44□□□□□ -0.42
SHTN1-202ENST00000355371 H3BQ85 93 aa12.44□□□□□ -0.42
SHTN1-202ENST00000355371 SPATA12Q7Z6I5 190 aa12.44□□□□□ -0.42
SHTN1-202ENST00000355371 LY6LH3BQJ8 138 aa12.43□□□□□ -0.42
SHTN1-202ENST00000355371 C19orf84I3L1E1 186 aa12.43□□□□□ -0.42
SHTN1-202ENST00000355371 MLST8Q9BVC4 326 aa12.43□□□□□ -0.42
SHTN1-202ENST00000355371 IGHV3-30P01768 117 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms