RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 SMIM17P0DL12 118 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 CKS2P33552 79 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 NDUFA6P56556 154 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 LINC00315P59091 139 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 C18orf32Q8TCD1 76 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 MGAM2Q2M2H8 2515 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 A8MWV9 139 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 CRYGDP07320 174 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 SNRPEP62304 92 aaKnown RBP6.91□□□□□ -1.3
NPHP1-202ENST00000355301 LGALS9BQ3B8N2 356 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 MRAP2Q96G30 205 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
NPHP1-202ENST00000355301 A0A087WWL8 130 aa6.9□□□□□ -1.3
NPHP1-202ENST00000355301 RNF183Q96D59 192 aa6.9□□□□□ -1.3
NPHP1-202ENST00000355301 PRELID3AQ96N28 172 aa6.9□□□□□ -1.3
NPHP1-202ENST00000355301 SAMD10Q9BYL1 202 aa6.9□□□□□ -1.3
NPHP1-202ENST00000355301 MRPL16Q9NX20 251 aaKnown RBP6.9□□□□□ -1.3
NPHP1-202ENST00000355301 LAMTOR2Q9Y2Q5 125 aa6.9□□□□□ -1.3
NPHP1-202ENST00000355301 SMKR1H3BMG3 65 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 NOP10Q9NPE3 64 aaKnown RBP6.89□□□□□ -1.31
NPHP1-202ENST00000355301 TRGV1A0A0A0MS02 117 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 TRAV26-2A0A0B4J265 109 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 GAS8-AS1O95177 125 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 NCR2O95944 276 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 HOXA5P20719 270 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 FAM74A4Q5TZK3 123 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 Q6ZTI0 123 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 BAGE3Q86Y29 109 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
NPHP1-202ENST00000355301 NPYP01303 97 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 MGPP08493 103 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 MIFP14174 115 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 LINC00310P59036 64 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 IQCJQ1A5X6 159 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 NRACQ8N912 160 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 TP53TG1Q9Y2A0 90 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 RHODO00212 210 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 RS1O15537 224 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 SERF1AO75920 110 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 ESDP10768 282 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 GATA1P15976 413 aaPredicted RBP6.88□□□□□ -1.31
NPHP1-202ENST00000355301 ZFP2Q6ZN57 461 aa6.88□□□□□ -1.31
NPHP1-202ENST00000355301 NACAE9PAV3 2078 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 F5H697 171 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 K7EIL1 84 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 NUPR1O60356 82 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 PPP1R17O96001 155 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 PRB2P02812 416 aaPredicted RBP6.87□□□□□ -1.31
NPHP1-202ENST00000355301 ZNF56Q15929 161 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 Q8NAQ8 132 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 EDA2RQ9HAV5 297 aa6.87□□□□□ -1.31
NPHP1-202ENST00000355301 TRAV4A0A0B4J268 109 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 LOC105371267A0A1B0GV96 52 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 PRSS47A8MTI9 375 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 M0QY20 66 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 EMP1P54849 157 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 NIT1Q86X76 327 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 LINC00612Q8N6U2 182 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 IGHV4-28A0A0C4DH34 117 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 LINC00614P0C842 121 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 OR4C5Q8NGB2 326 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 RPL39LQ96EH5 51 aaKnown RBP6.86□□□□□ -1.31
NPHP1-202ENST00000355301 C18orf15Q96N68 181 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 MAP1LC3AQ9H492 121 aa6.86□□□□□ -1.31
NPHP1-202ENST00000355301 TRGV2A0A075B6R0 118 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 IGHV3-73A0A0B4J1V6 119 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 GAGE12BA1L429 117 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 IFITM10A6NMD0 228 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 LYRM9A8MSI8 78 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 CIDEAO60543 219 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 GAGE7O76087 117 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 GAGE12FP0CL80 117 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 GAGE12GP0CL81 117 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 GAGE12IP0CL82 117 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 IFI27P40305 119 aaPredicted RBP6.85□□□□□ -1.31
NPHP1-202ENST00000355301 PDZD11Q5EBL8 140 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 PRSS3P2Q8NHM4 247 aa6.85□□□□□ -1.31
NPHP1-202ENST00000355301 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
NPHP1-202ENST00000355301 LOC389332A0A1B0GUA5 103 aa6.84□□□□□ -1.31
NPHP1-202ENST00000355301 H7C1H1 209 aa6.84□□□□□ -1.31
NPHP1-202ENST00000355301 IGHV3-53P01767 116 aa6.84□□□□□ -1.31
NPHP1-202ENST00000355301 SUMO2P61956 95 aaKnown RBP6.84□□□□□ -1.31
NPHP1-202ENST00000355301 RNASEKQ6P5S7 137 aaKnown RBP6.84□□□□□ -1.31
NPHP1-202ENST00000355301 ZNF479Q96JC4 524 aa6.84□□□□□ -1.31
NPHP1-202ENST00000355301 NXT2Q9NPJ8 142 aaKnown RBP6.84□□□□□ -1.31
NPHP1-202ENST00000355301 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
NPHP1-202ENST00000355301 TRBV6-5A0A0K0K1A5 114 aa6.84□□□□□ -1.32
NPHP1-202ENST00000355301 HSBP1O75506 76 aa6.84□□□□□ -1.32
NPHP1-202ENST00000355301 S100A2P29034 98 aa6.84□□□□□ -1.32
NPHP1-202ENST00000355301 FAM222AQ5U5X8 452 aa6.84□□□□□ -1.32
NPHP1-202ENST00000355301 Q6ZSN1 163 aa6.84□□□□□ -1.32
NPHP1-202ENST00000355301 SBSPONQ8IVN8 264 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms