RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 NCR3O14931 201 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 CCL25O15444 150 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 IGLV1-47P01700 117 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 SHANK1Q9Y566 2161 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 Q6ZSR3 168 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 ODF3L1Q8IXM7 274 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 SIRPDQ9H106 197 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 MSMPQ1L6U9 139 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 KMT2EQ8IZD2 1858 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 NUP210Q8TEM1 1887 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-202ENST00000355133 K7EMT4 169 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 PROP1O75360 226 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 Q6ZVH6 145 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 FAM167A-AS1Q96KT0 104 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 IGHG2P01859 326 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 C9orf47Q6ZRZ4 202 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 GPHB5Q86YW7 130 aa10.16□□□□□ -0.78
SCN8A-202ENST00000355133 MRPL36Q9P0J6 103 aaKnown RBP10.16□□□□□ -0.78
SCN8A-202ENST00000355133 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
SCN8A-202ENST00000355133 SPRY4Q9C004 299 aa10.15□□□□□ -0.78
SCN8A-202ENST00000355133 Q8NA96 180 aa10.15□□□□□ -0.78
SCN8A-202ENST00000355133 SMAD5-AS1Q9Y6J3 95 aa10.15□□□□□ -0.78
SCN8A-202ENST00000355133 GAGE12HA6NDE8 117 aa10.15□□□□□ -0.78
SCN8A-202ENST00000355133 GTSF1Q8WW33 167 aa10.15□□□□□ -0.78
SCN8A-202ENST00000355133 FUSP35637 526 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCN8A-202ENST00000355133 VSIG2Q96IQ7 327 aa10.14□□□□□ -0.79
SCN8A-202ENST00000355133 DNAJC9-AS1A6NH13 148 aa10.14□□□□□ -0.79
SCN8A-202ENST00000355133 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
SCN8A-202ENST00000355133 NDUFA1O15239 70 aa10.14□□□□□ -0.79
SCN8A-202ENST00000355133 NUPR1O60356 82 aa10.14□□□□□ -0.79
SCN8A-202ENST00000355133 UBE2AP49459 152 aa10.14□□□□□ -0.79
SCN8A-202ENST00000355133 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
SCN8A-202ENST00000355133 IGLL5B9A064 214 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 FAM208BQ5VWN6 2430 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 PLA2G2EQ9NZK7 142 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 IGLV2-14P01704 120 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 TMEM61Q8N0U2 210 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 ANKRD39Q53RE8 183 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 DEFB125Q8N687 156 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 A4D1N5 150 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 PCNX2A6NKB5 2137 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 MDFICQ9P1T7 246 aa10.13□□□□□ -0.79
SCN8A-202ENST00000355133 A6NDX4 124 aa10.12□□□□□ -0.79
SCN8A-202ENST00000355133 NCKAP5O14513 1909 aa10.12□□□□□ -0.79
SCN8A-202ENST00000355133 DENND4CQ5VZ89 1909 aa10.12□□□□□ -0.79
SCN8A-202ENST00000355133 BAALCQ8WXS3 180 aa10.11□□□□□ -0.79
SCN8A-202ENST00000355133 PLCE1Q9P212 2302 aa10.11□□□□□ -0.79
SCN8A-202ENST00000355133 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-202ENST00000355133 TMEM89A2RUT3 159 aa10.11□□□□□ -0.79
SCN8A-202ENST00000355133 C19orf84I3L1E1 186 aa10.11□□□□□ -0.79
SCN8A-202ENST00000355133 KLK5Q9Y337 293 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-202ENST00000355133 LYPD6Q86Y78 171 aa10.11□□□□□ -0.79
SCN8A-202ENST00000355133 TTTY13Q9BZ97 58 aa10.11□□□□□ -0.79
SCN8A-202ENST00000355133 SPAG11BQ08648 103 aa10.1□□□□□ -0.79
SCN8A-202ENST00000355133 WFDC11Q8NEX6 87 aa10.1□□□□□ -0.79
SCN8A-202ENST00000355133 TOMM6Q96B49 74 aa10.1□□□□□ -0.79
SCN8A-202ENST00000355133 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 FANCD2OSQ96PS1 177 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 TM2D2Q9BX73 214 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 H0YGX0 51 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 MAP6D1Q9H9H5 199 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 FBXL19-AS1Q494R0 122 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 A0A0J9YX75 114 aa10.09□□□□□ -0.79
SCN8A-202ENST00000355133 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-202ENST00000355133 MUC6Q6W4X9 2439 aa10.08□□□□□ -0.8
SCN8A-202ENST00000355133 PTPRQQ9UMZ3 2332 aa10.08□□□□□ -0.8
SCN8A-202ENST00000355133 KIF26AQ9ULI4 1882 aaPredicted RBP10.08□□□□□ -0.8
SCN8A-202ENST00000355133 TMEM263Q8WUH6 116 aaKnown RBP10.08□□□□□ -0.8
SCN8A-202ENST00000355133 RBM3P98179 157 aaKnown RBP10.08□□□□□ -0.8
SCN8A-202ENST00000355133 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
SCN8A-202ENST00000355133 TDRG1Q3Y452 100 aa10.07□□□□□ -0.8
SCN8A-202ENST00000355133 IGKV3D-7A0A0C4DH55 119 aa10.07□□□□□ -0.8
SCN8A-202ENST00000355133 NDUFB1O75438 58 aa10.07□□□□□ -0.8
SCN8A-202ENST00000355133 MED14OSP0DP75 135 aa10.07□□□□□ -0.8
SCN8A-202ENST00000355133 LOXL1Q08397 574 aaPredicted RBP10.07□□□□□ -0.8
SCN8A-202ENST00000355133 PRORYQ9H606 182 aa10.07□□□□□ -0.8
SCN8A-202ENST00000355133 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
SCN8A-202ENST00000355133 CCDC140Q96MF4 163 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 CTRLP40313 264 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 LMO4P61968 165 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 TNFRSF13BO14836 293 aaPredicted RBP10.06□□□□□ -0.8
SCN8A-202ENST00000355133 INSL3P51460 131 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 NREPQ16612 68 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 TP53TG3Q9ULZ0 132 aa10.06□□□□□ -0.8
SCN8A-202ENST00000355133 FRMD6-AS1P0C7T7 363 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 P0DMU3 169 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 FXYD2P54710 66 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 MIR7-3HGQ8N6C7 128 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 LECT2O14960 151 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
SCN8A-202ENST00000355133 C11orf45Q8TAV5 145 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms