RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 NPC2P61916 151 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 PDE6HQ13956 83 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 PMVKQ15126 192 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 RNF185Q96GF1 192 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 Q8N9W7 124 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 DNAJC30Q96LL9 226 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 SORL1Q92673 2214 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 SAA4P35542 130 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 IL17RELQ6ZVW7 336 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 RASL10AQ92737 203 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 IGHG4P01861 327 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 MGPP08493 103 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 SPANXN1Q5VSR9 72 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 C11orf71Q6IPW1 123 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 PKIGQ9Y2B9 76 aa7.15□□□□□ -1.26
SMG6-202ENST00000354901 TRGV11A0A075B6L2 103 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 TRBV6-1A0A0K0K1D8 114 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 CFC1BP0CG36 223 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 CFC1P0CG37 223 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 UBE2D3P61077 147 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 UBE2D2P62837 147 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 C2orf82Q6UX34 121 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 ODF3Q96PU9 254 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 BPESC1Q9GZL8 116 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 ZFHX3Q15911 3703 aa7.15□□□□□ -1.27
SMG6-202ENST00000354901 IGKV3-7A0A075B6H7 116 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 H3BMM0 161 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 HERVK_113P63121 156 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 HRCT1Q6UXD1 115 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 Q8N8P6 123 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 UBE2WQ96B02 151 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 SPANXA1Q9NS26 97 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 ELANEP08246 267 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 ASIPP42127 132 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 CEMP1Q6PRD7 247 aaPredicted RBP7.14□□□□□ -1.27
SMG6-202ENST00000354901 USP9YO00507 2555 aaPredicted RBP7.14□□□□□ -1.27
SMG6-202ENST00000354901 CACNA1AO00555 2505 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 TRAV12-3A0A0B4J271 114 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 PRSS2P07478 247 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 DUX5Q96PT3 197 aa7.14□□□□□ -1.27
SMG6-202ENST00000354901 M0R381 172 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 PSMG4Q5JS54 123 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 GAGE2AQ6NT46 116 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 Q8N6K4 173 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 TRAV41A0A0B4J266 112 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 UBE2D1P51668 147 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 DEFB1P60022 68 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 PIFOQ8TCI5 191 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 IGLC6P0CF74 106 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 BRD3OSQ6XYD6 125 aa7.13□□□□□ -1.27
SMG6-202ENST00000354901 ADARB2-AS1A8MUL3 147 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 LINC01587Q99440 93 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 SIRPDQ9H106 197 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 BUB3O43684 328 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 ZNF22P17026 224 aaPredicted RBP7.12□□□□□ -1.27
SMG6-202ENST00000354901 MINOS1Q5TGZ0 78 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 EEF1AKMT3Q96AZ1 226 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 MINOS1-NBL1R4GNA1 71 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 CENPEQ02224 2701 aa7.12□□□□□ -1.27
SMG6-202ENST00000354901 RBAKDNA6NC62 111 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 LINC01620Q4KN68 170 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 RPL11P62913 178 aaKnown RBP7.11□□□□□ -1.27
SMG6-202ENST00000354901 LY6EQ16553 131 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 FAM208BQ5VWN6 2430 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 C11orf21Q9P2W6 132 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 POLQO75417 2590 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 C14orf178Q8N769 122 aaPredicted RBP7.11□□□□□ -1.27
SMG6-202ENST00000354901 FAM110DQ8TAY7 271 aaPredicted RBP7.11□□□□□ -1.27
SMG6-202ENST00000354901 RPL39LQ96EH5 51 aaKnown RBP7.11□□□□□ -1.27
SMG6-202ENST00000354901 ZFAND3Q9H8U3 227 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 ABCA2Q9BZC7 2435 aa7.11□□□□□ -1.27
SMG6-202ENST00000354901 ACACBO00763 2458 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 IGHV3-11P01762 117 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 IGF1P05019 195 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 LGALS3P17931 250 aaKnown RBP7.1□□□□□ -1.27
SMG6-202ENST00000354901 RPL13AP40429 203 aaKnown RBP7.1□□□□□ -1.27
SMG6-202ENST00000354901 EBI3Q14213 229 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 CLEC2BQ92478 149 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 TRAV8-3A0A0A6YYJ7 113 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 CLPSL1A2RUU4 121 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 C11orf86A6NJI1 115 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 UBE2E1P51965 193 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 ATXN8Q156A1 80 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 METTL26Q96S19 204 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 VPS13CQ709C8 3753 aa7.1□□□□□ -1.27
SMG6-202ENST00000354901 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.27
SMG6-202ENST00000354901 A0A0J9YY99 117 aa7.09□□□□□ -1.27
SMG6-202ENST00000354901 DUSP14O95147 198 aaKnown RBP7.09□□□□□ -1.27
SMG6-202ENST00000354901 NDUFA7O95182 113 aa7.09□□□□□ -1.27
SMG6-202ENST00000354901 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
SMG6-202ENST00000354901 PKD1L2Q7Z442 2459 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms