RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 A0A1B0GX51 115 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 PAGE4O60829 102 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 VWC2Q2TAL6 325 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 ATP5L2Q7Z4Y8 100 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 STHQ8IWL8 128 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 ATOH7Q8N100 152 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 RHPN1-AS1Q9BWJ2 59 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 A0A087X0K7 114 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 IGHV7-4-1A0A0J9YVY3 117 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 CGB1A6NKQ9 187 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 C15orf61A6NNL5 157 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 K7EMT4 169 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 M0QXV9 152 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 CDK2AP2O75956 126 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 MIFP14174 115 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 DEFB131AP59861 70 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 KLK9Q2XQG4 91 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 SP6Q3SY56 376 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 PHLDA2Q53GA4 152 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 TMEM116Q8NCL8 245 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 MAP1LC3AQ9H492 121 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 PRO0461Q9UI25 63 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 KLK9Q9UKQ9 250 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 CELA1Q9UNI1 258 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
RTN3-204ENST00000354497 SMIM9A6NGZ8 99 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 CHEK1O14757 476 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 HLA-DRB4P13762 266 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 C1orf134Q5TEV5 83 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 OCC1Q8TAD7 63 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 TMEM147Q9BVK8 224 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 MAP1LC3CQ9BXW4 147 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 C21orf62Q9NYP8 219 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 HLA-DRB4X5D2U9 266 aa8.07□□□□□ -1.12
RTN3-204ENST00000354497 A0A1W2PRE2 83 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
RTN3-204ENST00000354497 NDUFB4O95168 129 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 NTF3P20783 257 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 ASIPP42127 132 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 HERV-K104P61576 105 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 RPL11P62913 178 aaKnown RBP8.06□□□□□ -1.12
RTN3-204ENST00000354497 TAL2Q16559 108 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 C12orf74Q32Q52 190 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 TMEM14EPQ6UXP3 125 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 Q6ZRM9 215 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 Q8N1X5 172 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 FAM19A2Q8N3H0 131 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 DAZAP1Q96EP5 407 aaKnown RBP8.06□□□□□ -1.12
RTN3-204ENST00000354497 GPHA2Q96T91 129 aa8.06□□□□□ -1.12
RTN3-204ENST00000354497 HSD17B10Q99714 261 aaKnown RBP8.06□□□□□ -1.12
RTN3-204ENST00000354497 TRBV20OR9-2A0A075B6H5 130 aa8.05□□□□□ -1.12
RTN3-204ENST00000354497 IGKV1D-8A0A087WSZ0 117 aa8.05□□□□□ -1.12
RTN3-204ENST00000354497 TNFSF12O43508 249 aa8.05□□□□□ -1.12
RTN3-204ENST00000354497 SYNGR2O43760 224 aa8.05□□□□□ -1.12
RTN3-204ENST00000354497 CXorf1O96002 111 aa8.05□□□□□ -1.12
RTN3-204ENST00000354497 Q6ZR54 194 aa8.05□□□□□ -1.12
RTN3-204ENST00000354497 SYT8Q8NBV8 401 aa8.05□□□□□ -1.12
RTN3-204ENST00000354497 ZNF331Q9NQX6 463 aaPredicted RBP8.05□□□□□ -1.12
RTN3-204ENST00000354497 APOBP04114 4563 aaKnown RBP8.04□□□□□ -1.12
RTN3-204ENST00000354497 TRAV3A0A0B4J244 114 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 IGKV1D-13A0A0B4J2D9 117 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 MPDU1O75352 247 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 LEPROTL1O95214 131 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 IGKV1-13P0DP09 117 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 OPRK1P41145 380 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 MRPL23Q16540 153 aaKnown RBP8.04□□□□□ -1.12
RTN3-204ENST00000354497 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 FAM231DQ6ZW35 169 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 ZNF114Q8NC26 417 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 MDFICQ9P1T7 246 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 X6R8D5 127 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 DNAH5Q8TE73 4624 aa8.04□□□□□ -1.12
RTN3-204ENST00000354497 IGHV3-66A0A0C4DH42 116 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 IGLV2-14P01704 120 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 NDUFV3P56181 108 aaKnown RBP8.03□□□□□ -1.12
RTN3-204ENST00000354497 BRWD1-AS2P59051 145 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 WFDC2Q14508 124 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 YTHDF2Q9Y5A9 579 aaKnown RBP8.03□□□□□ -1.12
RTN3-204ENST00000354497 hDV102S1A0JD36 115 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 KNCNA6PVL3 124 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 FNDC10F2Z333 226 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 UPK2O00526 184 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 PPYP01298 95 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 MT-ATP8P03928 68 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 G6PCP35575 357 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 SLC38A11Q08AI6 406 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 MORN3Q6PF18 240 aaPredicted RBP8.03□□□□□ -1.12
RTN3-204ENST00000354497 PPDPFLQ8WWR9 84 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 SRSF8Q9BRL6 282 aaKnown RBP8.03□□□□□ -1.12
RTN3-204ENST00000354497 TMEM14BQ9NUH8 114 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 PSENENQ9NZ42 101 aa8.03□□□□□ -1.12
RTN3-204ENST00000354497 IGHV1-24A0A0C4DH33 117 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 LOC100996750A0A140TA64 210 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 GIG44P09565 113 aaPredicted RBP8.02□□□□□ -1.13
RTN3-204ENST00000354497 XGP55808 180 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 TAS2R45P59539 299 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 WT1-ASQ06250 92 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 CATR1Q13166 79 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 ETDBQ3ZM63 59 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms