RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ECSCRQ19T08 205 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 SCGB2A1O75556 95 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 TSHBP01222 138 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 IGF1P05019 195 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 C15orf32Q32M92 178 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 NTN5Q8WTR8 489 aaPredicted RBP14.11□□□□□ -0.15
SCARF1-202ENST00000348987 HERVK_113P61574 105 aa14.1□□□□□ -0.15
SCARF1-202ENST00000348987 RPL32P62910 135 aaKnown RBP14.1□□□□□ -0.15
SCARF1-202ENST00000348987 Q8N1Y9 231 aa14.1□□□□□ -0.15
SCARF1-202ENST00000348987 ZFAND3Q9H8U3 227 aa14.1□□□□□ -0.15
SCARF1-202ENST00000348987 CLEC3BP05452 202 aa14.09□□□□□ -0.15
SCARF1-202ENST00000348987 EBI3Q14213 229 aa14.09□□□□□ -0.15
SCARF1-202ENST00000348987 DPH3P1Q9H4G8 78 aa14.09□□□□□ -0.15
SCARF1-202ENST00000348987 G3V318 75 aa14.09□□□□□ -0.15
SCARF1-202ENST00000348987 EIF4EBP3O60516 100 aaPredicted RBP14.09□□□□□ -0.15
SCARF1-202ENST00000348987 TMEM170BQ5T4T1 132 aa14.09□□□□□ -0.15
SCARF1-202ENST00000348987 A4D1N5 150 aa14.08□□□□□ -0.16
SCARF1-202ENST00000348987 FAM110AQ9BQ89 295 aa14.08□□□□□ -0.16
SCARF1-202ENST00000348987 SIRPDQ9H106 197 aa14.08□□□□□ -0.16
SCARF1-202ENST00000348987 ATP6V0E1O15342 81 aa14.08□□□□□ -0.16
SCARF1-202ENST00000348987 TP53TG1Q9Y2A0 90 aa14.08□□□□□ -0.16
SCARF1-202ENST00000348987 ELANEP08246 267 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 S100A4P26447 101 aaKnown RBP14.07□□□□□ -0.16
SCARF1-202ENST00000348987 ARL3P36405 182 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 C1orf122Q6ZSJ8 110 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 UBTD1Q9HAC8 227 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 TEX49A0A1B0GTD5 131 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 CLPSL1A2RUU4 121 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 FAM159AQ6UWV7 190 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 C9orf47Q6ZRZ4 202 aa14.07□□□□□ -0.16
SCARF1-202ENST00000348987 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
SCARF1-202ENST00000348987 PHLDA3Q9Y5J5 127 aa14.06□□□□□ -0.16
SCARF1-202ENST00000348987 ZFYVE26Q68DK2 2539 aa14.06□□□□□ -0.16
SCARF1-202ENST00000348987 C19orf84I3L1E1 186 aa14.06□□□□□ -0.16
SCARF1-202ENST00000348987 RPL39P62891 51 aaKnown RBP14.06□□□□□ -0.16
SCARF1-202ENST00000348987 MINOS1Q5TGZ0 78 aa14.06□□□□□ -0.16
SCARF1-202ENST00000348987 MINOS1-NBL1R4GNA1 71 aa14.06□□□□□ -0.16
SCARF1-202ENST00000348987 CENPVL3A0A0U1RRI6 287 aa14.05□□□□□ -0.16
SCARF1-202ENST00000348987 SAA4P35542 130 aa14.05□□□□□ -0.16
SCARF1-202ENST00000348987 ZNRF2Q8NHG8 242 aa14.05□□□□□ -0.16
SCARF1-202ENST00000348987 ODF3Q96PU9 254 aa14.05□□□□□ -0.16
SCARF1-202ENST00000348987 AMELXQ99217 191 aa14.05□□□□□ -0.16
SCARF1-202ENST00000348987 PMVKQ15126 192 aa14.05□□□□□ -0.16
SCARF1-202ENST00000348987 GPHB5Q86YW7 130 aa14.05□□□□□ -0.16
SCARF1-202ENST00000348987 IGHV4-39P01824 125 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 PAPPA-AS1Q5QFB9 102 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 CLEC19AQ6UXS0 136 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 CCDC140Q96MF4 163 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 IGIPA6NJ69 53 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 J3QQQ9 107 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 M0QXV9 152 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 C15orf53Q8NAA6 179 aa14.04□□□□□ -0.16
SCARF1-202ENST00000348987 TMEM263Q8WUH6 116 aaKnown RBP14.04□□□□□ -0.16
SCARF1-202ENST00000348987 OOSP1A8MZH6 123 aa14.03□□□□□ -0.16
SCARF1-202ENST00000348987 BEX4Q9NWD9 120 aaPredicted RBP14.03□□□□□ -0.16
SCARF1-202ENST00000348987 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.16
SCARF1-202ENST00000348987 TRAV8-4A0A0B4J246 113 aa14.02□□□□□ -0.16
SCARF1-202ENST00000348987 Q1RN00 199 aa14.02□□□□□ -0.16
SCARF1-202ENST00000348987 ACACBO00763 2458 aa14.02□□□□□ -0.16
SCARF1-202ENST00000348987 CENPEQ02224 2701 aa14.02□□□□□ -0.17
SCARF1-202ENST00000348987 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.17
SCARF1-202ENST00000348987 LINC01620Q4KN68 170 aa14.02□□□□□ -0.17
SCARF1-202ENST00000348987 Q6Q795 121 aa14.02□□□□□ -0.17
SCARF1-202ENST00000348987 FAM110DQ8TAY7 271 aaPredicted RBP14.02□□□□□ -0.17
SCARF1-202ENST00000348987 BPESC1Q9GZL8 116 aa14.02□□□□□ -0.17
SCARF1-202ENST00000348987 LINC00527Q9UJ94 153 aa14.02□□□□□ -0.17
SCARF1-202ENST00000348987 CACNA1AO00555 2505 aa14.02□□□□□ -0.17
SCARF1-202ENST00000348987 IGSF10Q6WRI0 2623 aa14.01□□□□□ -0.17
SCARF1-202ENST00000348987 GNLYP22749 145 aa14.01□□□□□ -0.17
SCARF1-202ENST00000348987 C16orf92Q96LL3 132 aa14.01□□□□□ -0.17
SCARF1-202ENST00000348987 USP9XQ93008 2570 aaPredicted RBP14.01□□□□□ -0.17
SCARF1-202ENST00000348987 DEFB1P60022 68 aa14.01□□□□□ -0.17
SCARF1-202ENST00000348987 IGHV3OR16-10A0A075B7F0 116 aa14□□□□□ -0.17
SCARF1-202ENST00000348987 GNRH2O43555 120 aa14□□□□□ -0.17
SCARF1-202ENST00000348987 TMEM219Q86XT9 240 aa14□□□□□ -0.17
SCARF1-202ENST00000348987 MUSTN1Q8IVN3 82 aa14□□□□□ -0.17
SCARF1-202ENST00000348987 ABCA2Q9BZC7 2435 aa14□□□□□ -0.17
SCARF1-202ENST00000348987 UBE2E1P51965 193 aa14□□□□□ -0.17
SCARF1-202ENST00000348987 ATXN8Q156A1 80 aa14□□□□□ -0.17
SCARF1-202ENST00000348987 MRPL53Q96EL3 112 aaKnown RBP14□□□□□ -0.17
SCARF1-202ENST00000348987 IGHV1-69DA0A0B4J2H0 117 aa13.99□□□□□ -0.17
SCARF1-202ENST00000348987 P0DMU3 169 aa13.99□□□□□ -0.17
SCARF1-202ENST00000348987 FAM231AP0DMU4 169 aa13.99□□□□□ -0.17
SCARF1-202ENST00000348987 FAM231CP0DMU5 169 aa13.99□□□□□ -0.17
SCARF1-202ENST00000348987 C20orf173Q96LM9 149 aa13.99□□□□□ -0.17
SCARF1-202ENST00000348987 MYO18BQ8IUG5 2567 aa13.99□□□□□ -0.17
SCARF1-202ENST00000348987 IGHV3-64A0A075B6Q5 118 aa13.99□□□□□ -0.17
SCARF1-202ENST00000348987 LMO4P61968 165 aa13.98□□□□□ -0.17
SCARF1-202ENST00000348987 ZFAND2AQ8N6M9 145 aa13.98□□□□□ -0.17
SCARF1-202ENST00000348987 METTL26Q96S19 204 aa13.98□□□□□ -0.17
SCARF1-202ENST00000348987 MEIG1Q5JSS6 88 aa13.98□□□□□ -0.17
SCARF1-202ENST00000348987 TRAV21A0A0B4J279 112 aa13.97□□□□□ -0.17
SCARF1-202ENST00000348987 A0A0B4J2C4 111 aa13.97□□□□□ -0.17
SCARF1-202ENST00000348987 ZNF876PQ49A33 203 aa13.97□□□□□ -0.17
SCARF1-202ENST00000348987 PPP1R17O96001 155 aa13.96□□□□□ -0.17
SCARF1-202ENST00000348987 RPL13AP40429 203 aaKnown RBP13.96□□□□□ -0.17
SCARF1-202ENST00000348987 OR10J6PQ8NGY7 276 aa13.96□□□□□ -0.17
SCARF1-202ENST00000348987 H3BMM0 161 aa13.96□□□□□ -0.17
SCARF1-202ENST00000348987 ITLN2Q8WWU7 325 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-202ENST00000348987 UBE2WQ96B02 151 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms