RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 C1QTNF4Q9BXJ3 329 aa11.46□□□□□ -0.57
RAB5C-201ENST00000346213 TP53TG3Q9ULZ0 132 aa11.46□□□□□ -0.57
RAB5C-201ENST00000346213 M0R143 59 aa11.46□□□□□ -0.58
RAB5C-201ENST00000346213 SRIP30626 198 aa11.46□□□□□ -0.58
RAB5C-201ENST00000346213 ZFAND2AQ8N6M9 145 aa11.46□□□□□ -0.58
RAB5C-201ENST00000346213 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.58
RAB5C-201ENST00000346213 BIRC6Q9NR09 4857 aa11.46□□□□□ -0.58
RAB5C-201ENST00000346213 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 LY6G6CO95867 125 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 ESDP10768 282 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 FABP4P15090 132 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 CTRLP40313 264 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 EMP1P54849 157 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 TMEM256Q8N2U0 113 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 FER1L6-AS1Q8NA97 138 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 APLNQ9ULZ1 77 aa11.45□□□□□ -0.58
RAB5C-201ENST00000346213 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
RAB5C-201ENST00000346213 AZU1P20160 251 aa11.44□□□□□ -0.58
RAB5C-201ENST00000346213 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
RAB5C-201ENST00000346213 AMBPP02760 352 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 PRR9Q5T870 116 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 ZNF493Q6ZR52 646 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 BAGE3Q86Y29 109 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 TMEM18Q96B42 140 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 ALKBH7Q9BT30 221 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-201ENST00000346213 TPPP3Q9BW30 176 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 TRAV21A0A0B4J279 112 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 NUPR1O60356 82 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 CNFNQ9BYD5 112 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 PRO1933Q9H354 126 aa11.43□□□□□ -0.58
RAB5C-201ENST00000346213 F2Z2F3 143 aa11.42□□□□□ -0.58
RAB5C-201ENST00000346213 LINC00310P59036 64 aa11.42□□□□□ -0.58
RAB5C-201ENST00000346213 FAM222AQ5U5X8 452 aa11.42□□□□□ -0.58
RAB5C-201ENST00000346213 ODF3Q96PU9 254 aa11.42□□□□□ -0.58
RAB5C-201ENST00000346213 DKK2Q9UBU2 259 aa11.42□□□□□ -0.58
RAB5C-201ENST00000346213 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-201ENST00000346213 GOLT1BQ9Y3E0 138 aa11.42□□□□□ -0.58
RAB5C-201ENST00000346213 DNAH2Q9P225 4427 aa11.41□□□□□ -0.58
RAB5C-201ENST00000346213 IGLL5B9A064 214 aa11.41□□□□□ -0.58
RAB5C-201ENST00000346213 SERF1AO75920 110 aa11.41□□□□□ -0.58
RAB5C-201ENST00000346213 GPX1P07203 203 aa11.41□□□□□ -0.58
RAB5C-201ENST00000346213 PCP4P48539 62 aa11.41□□□□□ -0.58
RAB5C-201ENST00000346213 C18orf32Q8TCD1 76 aa11.41□□□□□ -0.58
RAB5C-201ENST00000346213 DLEU1O43261 78 aa11.4□□□□□ -0.58
RAB5C-201ENST00000346213 DUSP14O95147 198 aaKnown RBP11.4□□□□□ -0.58
RAB5C-201ENST00000346213 IQCJQ1A5X6 159 aa11.4□□□□□ -0.58
RAB5C-201ENST00000346213 KLLNB2CW77 178 aa11.4□□□□□ -0.59
RAB5C-201ENST00000346213 Q6ZQT7 251 aa11.4□□□□□ -0.59
RAB5C-201ENST00000346213 ZNF664Q8N3J9 261 aa11.4□□□□□ -0.59
RAB5C-201ENST00000346213 IGHV4-4A0A075B6R2 117 aa11.39□□□□□ -0.59
RAB5C-201ENST00000346213 TRAV10A0A0B4J240 114 aa11.39□□□□□ -0.59
RAB5C-201ENST00000346213 INSP01308 110 aa11.39□□□□□ -0.59
RAB5C-201ENST00000346213 SMIM9A6NGZ8 99 aa11.38□□□□□ -0.59
RAB5C-201ENST00000346213 J3KRW8 73 aa11.38□□□□□ -0.59
RAB5C-201ENST00000346213 NTF3P20783 257 aa11.38□□□□□ -0.59
RAB5C-201ENST00000346213 RNASE4P34096 147 aaKnown RBP11.38□□□□□ -0.59
RAB5C-201ENST00000346213 LEPP41159 167 aa11.38□□□□□ -0.59
RAB5C-201ENST00000346213 COTL1Q14019 142 aa11.38□□□□□ -0.59
RAB5C-201ENST00000346213 DEFB131BA0A096LNP1 70 aa11.37□□□□□ -0.59
RAB5C-201ENST00000346213 SNAI2O43623 268 aa11.37□□□□□ -0.59
RAB5C-201ENST00000346213 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
RAB5C-201ENST00000346213 TWIST1Q15672 202 aa11.37□□□□□ -0.59
RAB5C-201ENST00000346213 RRN3P1Q2M238 152 aa11.37□□□□□ -0.59
RAB5C-201ENST00000346213 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
RAB5C-201ENST00000346213 ZNF25P17030 456 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-201ENST00000346213 LGALS9CQ6DKI2 356 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 TMEM191AQ9H0A3 160 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 FAT2Q9NYQ8 4349 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 SPART-AS1P0CW21 52 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 MED14OSP0DP75 135 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 CDKN1BP46527 198 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 MUC21Q5SSG8 566 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 KCNS1Q96KK3 526 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 SNHG12Q9BXW3 62 aa11.36□□□□□ -0.59
RAB5C-201ENST00000346213 EREGO14944 169 aa11.35□□□□□ -0.59
RAB5C-201ENST00000346213 TSPOP30536 169 aa11.35□□□□□ -0.59
RAB5C-201ENST00000346213 CACNG7P62955 275 aa11.35□□□□□ -0.59
RAB5C-201ENST00000346213 ANXA2RQ3ZCQ2 193 aa11.35□□□□□ -0.59
RAB5C-201ENST00000346213 TMEM208Q9BTX3 173 aa11.35□□□□□ -0.59
RAB5C-201ENST00000346213 HECTD4Q9Y4D8 3996 aa11.35□□□□□ -0.59
RAB5C-201ENST00000346213 C7orf71A4D174 169 aa11.34□□□□□ -0.59
RAB5C-201ENST00000346213 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
RAB5C-201ENST00000346213 MSRB1Q9NZV6 116 aa11.34□□□□□ -0.59
RAB5C-201ENST00000346213 NAGKQ9UJ70 344 aa11.34□□□□□ -0.59
RAB5C-201ENST00000346213 MUC4Q99102 2169 aa11.34□□□□□ -0.59
RAB5C-201ENST00000346213 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 SAMD10Q9BYL1 202 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 ZNF324O75467 553 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-201ENST00000346213 HTN1P15515 57 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 ASIPP42127 132 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 MRPL51Q4U2R6 128 aaKnown RBP11.33□□□□□ -0.6
RAB5C-201ENST00000346213 NIT1Q86X76 327 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 LINC01587Q99440 93 aa11.33□□□□□ -0.6
RAB5C-201ENST00000346213 H3BVH4 76 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms