RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 WT1P19544 449 aaPredicted RBP13.88□□□□□ -0.19
SMC4-201ENST00000344722 RNF152Q8N8N0 203 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 VSIG2Q96IQ7 327 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 TMEM61Q8N0U2 210 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 MDFICQ9P1T7 246 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 MYCNOSP40205 109 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 NKAPP1Q8N9T2 125 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 COX7B2Q8TF08 81 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 TRAV4A0A0B4J268 109 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 LINC00574Q9H8X3 128 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 KIAA1549LQ6ZVL6 1849 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 ELANEP08246 267 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 A0A0J9YXY3 114 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 CGB3P0DN86 165 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 CGB7P0DN87 165 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 NFE4Q86UQ8 179 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 ROS1P08922 2347 aa13.87□□□□□ -0.19
SMC4-201ENST00000344722 CFAP126Q5VTH2 177 aa13.86□□□□□ -0.19
SMC4-201ENST00000344722 COL4A4P53420 1690 aaPredicted RBP13.86□□□□□ -0.19
SMC4-201ENST00000344722 OPRPNQ99935 248 aaPredicted RBP13.86□□□□□ -0.19
SMC4-201ENST00000344722 DAZ2Q13117 558 aaKnown RBP13.86□□□□□ -0.19
SMC4-201ENST00000344722 DAZ4Q86SG3 579 aaKnown RBP13.86□□□□□ -0.19
SMC4-201ENST00000344722 DAZ3Q9NR90 486 aaKnown RBP13.86□□□□□ -0.19
SMC4-201ENST00000344722 UFSP1Q6NVU6 142 aa13.85□□□□□ -0.19
SMC4-201ENST00000344722 A0A0J9YY99 117 aa13.85□□□□□ -0.19
SMC4-201ENST00000344722 LECT2O14960 151 aa13.85□□□□□ -0.19
SMC4-201ENST00000344722 NCKAP5O14513 1909 aa13.85□□□□□ -0.19
SMC4-201ENST00000344722 COX7A2LO14548 114 aa13.84□□□□□ -0.19
SMC4-201ENST00000344722 XCL1P47992 114 aa13.84□□□□□ -0.19
SMC4-201ENST00000344722 Q8N9W7 124 aa13.84□□□□□ -0.19
SMC4-201ENST00000344722 PRR30Q53SZ7 412 aaPredicted RBP13.83□□□□□ -0.2
SMC4-201ENST00000344722 CLUHP3Q96NS8 147 aa13.83□□□□□ -0.2
SMC4-201ENST00000344722 KIF26AQ9ULI4 1882 aaPredicted RBP13.83□□□□□ -0.2
SMC4-201ENST00000344722 TRBV30A0A0K0K1B3 111 aa13.83□□□□□ -0.2
SMC4-201ENST00000344722 K7EQD1 137 aa13.83□□□□□ -0.2
SMC4-201ENST00000344722 FANCD2OSQ96PS1 177 aa13.82□□□□□ -0.2
SMC4-201ENST00000344722 DOCK10Q96BY6 2186 aa13.82□□□□□ -0.2
SMC4-201ENST00000344722 PKDREJQ9NTG1 2253 aa13.82□□□□□ -0.2
SMC4-201ENST00000344722 C5orf38Q86SI9 138 aa13.82□□□□□ -0.2
SMC4-201ENST00000344722 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
SMC4-201ENST00000344722 LY6DQ14210 128 aa13.81□□□□□ -0.2
SMC4-201ENST00000344722 RNF185Q96GF1 192 aa13.81□□□□□ -0.2
SMC4-201ENST00000344722 ANGP03950 147 aaKnown RBP13.81□□□□□ -0.2
SMC4-201ENST00000344722 CRIP1P50238 77 aa13.81□□□□□ -0.2
SMC4-201ENST00000344722 DAD1P61803 113 aa13.81□□□□□ -0.2
SMC4-201ENST00000344722 IGFL2Q6UWQ7 119 aa13.81□□□□□ -0.2
SMC4-201ENST00000344722 C1orf229Q6ZS94 237 aaPredicted RBP13.81□□□□□ -0.2
SMC4-201ENST00000344722 AJUBAQ96IF1 538 aa13.81□□□□□ -0.2
SMC4-201ENST00000344722 SPTBN1Q01082 2364 aaKnown RBP13.81□□□□□ -0.2
SMC4-201ENST00000344722 XGP55808 180 aa13.81□□□□□ -0.2
SMC4-201ENST00000344722 IMUPQ9GZP8 106 aa13.8□□□□□ -0.2
SMC4-201ENST00000344722 NOP10Q9NPE3 64 aaKnown RBP13.8□□□□□ -0.2
SMC4-201ENST00000344722 TMEM256-PLSCR3K7ERE1 68 aa13.79□□□□□ -0.2
SMC4-201ENST00000344722 C14orf132Q9NPU4 83 aa13.79□□□□□ -0.2
SMC4-201ENST00000344722 IGHV3-33P01772 117 aa13.79□□□□□ -0.2
SMC4-201ENST00000344722 TMEM223A0PJW6 202 aa13.79□□□□□ -0.2
SMC4-201ENST00000344722 HIST2H2BCQ6DN03 193 aa13.79□□□□□ -0.2
SMC4-201ENST00000344722 F5H768 121 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 K7EMT4 169 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 CLPSL2Q6UWE3 100 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 HIST2H2BDQ6DRA6 164 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 Q9HAA7 133 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 TRIAP1O43715 76 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 NDUFA7O95182 113 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 IGLV2-11P01706 119 aa13.78□□□□□ -0.2
SMC4-201ENST00000344722 GNLYP22749 145 aa13.77□□□□□ -0.2
SMC4-201ENST00000344722 POLEQ07864 2286 aa13.77□□□□□ -0.2
SMC4-201ENST00000344722 Q8N7P7 452 aa13.77□□□□□ -0.21
SMC4-201ENST00000344722 CCDC179H3BU77 68 aa13.77□□□□□ -0.21
SMC4-201ENST00000344722 J3QLI3 93 aa13.77□□□□□ -0.21
SMC4-201ENST00000344722 C5orf56Q8N8D9 126 aa13.77□□□□□ -0.21
SMC4-201ENST00000344722 NCOA6Q14686 2063 aaPredicted RBP13.77□□□□□ -0.21
SMC4-201ENST00000344722 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
SMC4-201ENST00000344722 TRBV7-3A0A075B6L6 115 aa13.76□□□□□ -0.21
SMC4-201ENST00000344722 MRPS12O15235 138 aaKnown RBP13.76□□□□□ -0.21
SMC4-201ENST00000344722 FUSP35637 526 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMC4-201ENST00000344722 MSMPQ1L6U9 139 aa13.76□□□□□ -0.21
SMC4-201ENST00000344722 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
SMC4-201ENST00000344722 IGHV3-30P01768 117 aa13.76□□□□□ -0.21
SMC4-201ENST00000344722 IGHV3-30-5P0DP03 117 aa13.76□□□□□ -0.21
SMC4-201ENST00000344722 TMEM131Q92545 1883 aa13.75□□□□□ -0.21
SMC4-201ENST00000344722 INSL3P51460 131 aa13.75□□□□□ -0.21
SMC4-201ENST00000344722 PDE6GP18545 87 aa13.75□□□□□ -0.21
SMC4-201ENST00000344722 BRK1Q8WUW1 75 aa13.75□□□□□ -0.21
SMC4-201ENST00000344722 MALRD1Q5VYJ5 2156 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 ZNF22P17026 224 aaPredicted RBP13.74□□□□□ -0.21
SMC4-201ENST00000344722 ABCA1O95477 2261 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 Q6Q795 121 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 SDIM1Q6ZPB5 146 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 USF3Q68DE3 2245 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 ATP5EP2Q5VTU8 51 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 FAM236DA0A1B0GTK5 79 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 FAM236CP0DP71 79 aa13.74□□□□□ -0.21
SMC4-201ENST00000344722 NREPQ16612 68 aa13.73□□□□□ -0.21
SMC4-201ENST00000344722 URB1-AS1Q96HZ7 61 aa13.73□□□□□ -0.21
SMC4-201ENST00000344722 PLA2G2CQ5R387 149 aa13.73□□□□□ -0.21
SMC4-201ENST00000344722 ARFGEF3Q5TH69 2177 aa13.73□□□□□ -0.21
SMC4-201ENST00000344722 ADAMTS9Q9P2N4 1935 aa13.73□□□□□ -0.21
SMC4-201ENST00000344722 K7ENP7 123 aa13.72□□□□□ -0.21
SMC4-201ENST00000344722 SP5Q6BEB4 398 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms