RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 PLEKHA3Q9HB20 300 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 NAV3Q8IVL0 2385 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 CENPEQ02224 2701 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 TRAV8-2A0A0B4J237 113 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 IGLV1-51P01701 117 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 IFI27P40305 119 aaPredicted RBP5.53□□□□□ -1.52
ZNF540-202ENST00000343599 BRWD1-AS2P59051 145 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 EDDM3AQ14507 147 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 ZFP2Q6ZN57 461 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF329Q86UD4 541 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 PDPNQ86YL7 162 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 C15orf53Q8NAA6 179 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 DNAH17Q9UFH2 4485 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 UQCRQO14949 82 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 NPYP01303 97 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 C9orf153Q5TBE3 101 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 ZNF491Q8N8L2 437 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 HEATR1Q9H583 2144 aaKnown RBP5.52□□□□□ -1.53
ZNF540-202ENST00000343599 SMAD5-AS1Q9Y6J3 95 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 FAT2Q9NYQ8 4349 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 LGALS1P09382 135 aaKnown RBP5.52□□□□□ -1.53
ZNF540-202ENST00000343599 DUTP33316 252 aaKnown RBP5.52□□□□□ -1.53
ZNF540-202ENST00000343599 RPL13AP40429 203 aaKnown RBP5.52□□□□□ -1.53
ZNF540-202ENST00000343599 UBE2D1P51668 147 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 SPINK9Q5DT21 86 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 MAPKAPK5-AS1Q8N8E1 139 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 TRGV9Q99603 122 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 NOTCH2Q04721 2471 aa5.52□□□□□ -1.53
ZNF540-202ENST00000343599 LINC01546A6NGU7 62 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 TCL1BO95988 128 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 IGKCP01834 107 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 EPDR1Q9UM22 224 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 DCHS2Q6V1P9 2916 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 MEGF8Q7Z7M0 2845 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 FAM223BA6NKX1 122 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 CD28P10747 220 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 SLC25A48Q6ZT89 311 aaKnown RBP5.51□□□□□ -1.53
ZNF540-202ENST00000343599 TRPT1Q86TN4 253 aaKnown RBP5.51□□□□□ -1.53
ZNF540-202ENST00000343599 FAM223AQ8IWN6 122 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 POM121L12Q8N7R1 296 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 NABP2Q9BQ15 211 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 COL12A1Q99715 3063 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 RELNP78509 3460 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 P01737 135 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 Q5XG85 94 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 ZNF833PQ6ZTB9 187 aa5.51□□□□□ -1.53
ZNF540-202ENST00000343599 RS1O15537 224 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 HSPE1P61604 102 aaKnown RBP5.5□□□□□ -1.53
ZNF540-202ENST00000343599 ZNF415Q09FC8 603 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 C10orf126Q8N4M7 172 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 FAM167A-AS1Q96KT0 104 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 IMUPQ9GZP8 106 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 NBASA2RRP1 2371 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 TRAV8-1A0A0A6YYK1 113 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 HSPB6O14558 160 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 VPREB1P12018 145 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 CD177Q8N6Q3 437 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
ZNF540-202ENST00000343599 FAM240AA0A1B0GVK7 77 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 LINC01549A6NIU2 74 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 ATP5G1P05496 136 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 CD7P09564 240 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 GNG5P63218 68 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 ZC2HC1BQ5TFG8 222 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 GTSCR1Q86UQ5 136 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 CADP27708 2225 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 TMSB15BA0A087X1C1 80 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 LOC107984156A0A0G2JMH3 177 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 A0A1B0GUT8 65 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 RBAKDNA6NC62 111 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 SLC25A20O43772 301 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 DPM2O94777 84 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 CRYGAP11844 174 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 RIGQ13278 110 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 ARL17AQ8IVW1 177 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 TWIST1Q15672 202 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 C4orf26Q17RF5 130 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 LINC01620Q4KN68 170 aa5.49□□□□□ -1.53
ZNF540-202ENST00000343599 IGHV3OR15-7A0A075B7D8 119 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 H3BVH4 76 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 CA6P23280 308 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 DPH3Q96FX2 82 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 PRR25Q96S07 402 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 CALYQ9NYX4 217 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 AGRNO00468 2067 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 PRKDCP78527 4128 aaKnown RBP5.48□□□□□ -1.53
ZNF540-202ENST00000343599 GP9P14770 177 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 UBE2L3P68036 154 aaKnown RBP5.48□□□□□ -1.53
ZNF540-202ENST00000343599 ZCCHC24Q8N2G6 241 aaKnown RBP5.48□□□□□ -1.53
ZNF540-202ENST00000343599 FMC1Q96HJ9 113 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 KLK5Q9Y337 293 aaPredicted RBP5.48□□□□□ -1.53
ZNF540-202ENST00000343599 RYR2Q92736 4967 aa5.48□□□□□ -1.53
ZNF540-202ENST00000343599 CRYBG3Q68DQ2 2970 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 LYSTQ99698 3801 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 PRYO14603 147 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 ATP5LO75964 103 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 GYPEP15421 78 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 ZNF497Q6ZNH5 498 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms